Complete chloroplast genome of Ficus racemosa (Moraceae)

被引:3
|
作者
Mao, Qi [1 ,2 ]
Bi, Guiqi [3 ]
机构
[1] Guangdong Ocean Univ, Coll Agr, Zhanjiang, Peoples R China
[2] Agr Univ South China, Coll Hort, Guangzhou, Guangdong, Peoples R China
[3] Ocean Univ China, Coll Marine Life Sci, Qingdao 266003, Peoples R China
关键词
Chloroplast genome; Ficus racemosa; Moraceae; PHYLOGENETIC ANALYSIS; READ ALIGNMENT; ANNOTATION;
D O I
10.3109/19401736.2015.1106488
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Ficus racemosa, with immense medicinal value, and known as Cluster Fig Tree, Indian Fig Tree or Goolar (Gular) Figis, is a species of plant which belongs to family Moraceae. The complete chloroplast genome of Ficus racemosa was obtained by de novo assembly using next-generation sequencing data. The chloroplast genome of F. racemosa was 159 473 bp in length, which consisted of a large single region (88 110 bp), a small single copy region (20 007 bp) and a pair of invert repeat regions (25 678 bp). The overall GC content of this chloroplast genome was 36.0%. The chloroplast genome harbored 117 genes, including 84 protein-coding genes, 27 tRNA, and eight rRNA genes (4.5S rRNA, 5S rRNA, 16s rRNA and 23s rRNA) that were two copied. Phylogenetic analysis of the complete chloroplast genome sequences with the report-related chloroplast genomes revealed that Ficus racemosa is most closely related to Morus indica, a typical higher plant in fiamly Moraceae.
引用
收藏
页码:4655 / 4656
页数:2
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