Integrating QSAR and read-across for environmental assessment

被引:9
|
作者
Benfenati, E. [1 ]
Roncaglioni, A. [1 ]
Petoumenou, M. I. [1 ]
Cappelli, C. I. [1 ]
Gini, G. [2 ]
机构
[1] IRCCS, Ist Ric Farmacol Mario Negri, Milan, Italy
[2] Politecn Milan, Dipartimento Elettron Informaz & Bioingn, I-20133 Milan, Italy
关键词
read-across; BCF; REACH; QSAR; log P; BIOCONCENTRATION FACTOR BCF; CHEMICALS; MODELS;
D O I
10.1080/1062936X.2015.1078408
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Read-across and QSAR have different traditions and drawbacks. We address here two main questions: (1) How do we solve the issue of the subjectivity in the evaluation of data and results, which may be particularly critical for read-across, but may have a role also for the QSAR assessment? (2) How do we take advantage of the results of both approaches to support each other? The QSAR model starts from the training set. The presence of similar chemicals with property values close to that predicted can support the result. The approach in read-across is the opposite. The assessment is focused on the few substances similar to the target. The data quality of the similar chemicals is fundamental. A risk is poor standardization in the definition of similarity', because different approaches may be applied. Inspired by the principles of high transparency and reproducibility, a new program for read-across, called ToxRead, has been developed and made freely available (www.toxgate.eu). The output of ToxRead can be compared and integrated with the output of QSAR, within a weight-of-evidence strategy. We discuss the evaluation and integration of ToxRead and QSAR with examples of the assessment of bioconcentration factors of chemicals.
引用
收藏
页码:605 / 618
页数:14
相关论文
共 50 条
  • [21] Workshop: Use of "read-across" for chemical safety assessment under REACH
    Patlewicz, Grace
    Roberts, David W.
    Aptula, Aynur
    Blackburn, Karen
    Hubesch, Bruno
    REGULATORY TOXICOLOGY AND PHARMACOLOGY, 2013, 65 (02) : 226 - 228
  • [22] Oral bioaccessibility testing and read-across hazard assessment of nickel compounds
    Henderson, Rayetta G.
    Cappellini, Danielle
    Seilkop, Steven K.
    Bates, Hudson K.
    Oiler, Adriana R.
    REGULATORY TOXICOLOGY AND PHARMACOLOGY, 2012, 63 (01) : 20 - 28
  • [23] Read-across case studies to implement new approaches for hazard assessment
    Escher, S. E.
    TOXICOLOGY LETTERS, 2023, 384 : S21 - S21
  • [24] An assessment framework for PBK models including read-across approach - an international effort
    Worth, A.
    Paini, A.
    Madden, J.
    Sachana, M.
    Tan, C.
    TOXICOLOGY LETTERS, 2023, 384 : S33 - S33
  • [25] A framework for grouping and read-across of nanomaterials- supporting innovation and risk assessment
    Stone, Vicki
    Gottardo, Stefania
    Bleeker, Eric A. J.
    Braakhuis, Hedwig
    Dekkers, Susan
    Fernandes, Teresa
    Haase, Andrea
    Hunt, Neil
    Hristozov, Danail
    Jantunen, Paula
    Jeliazkova, Nina
    Johnston, Helinor
    Lamon, Lara
    Murphy, Fiona
    Rasmussen, Kirsten
    Rauscher, Hubert
    Jimenez, Araceli Sanchez
    Svendsen, Claus
    Spurgeon, David
    Vazquez-Campos, Socorro
    Wohlleben, Wendel
    Oomen, Agnes G.
    NANO TODAY, 2020, 35
  • [26] A generalizable definition of chemical similarity for read-across
    Matteo Floris
    Alberto Manganaro
    Orazio Nicolotti
    Ricardo Medda
    Giuseppe Felice Mangiatordi
    Emilio Benfenati
    Journal of Cheminformatics, 6
  • [27] ToxGPS, a solution guiding read-across workflow based on chemoinformatics and safety assessment
    Yang, C.
    Bienfait, B.
    Cronin, M. T. D.
    Fioravanzo, E.
    Gatnik, M.
    Kleinoeder, T.
    Park, J.
    Liu, J.
    Magdziarz, T.
    Marusczyk, J.
    Mostrag, A.
    Mulcahy, M.
    Rathman, J. F.
    Sacher, O.
    Schwab, C.
    Tarkhov, A.
    TOXICOLOGY LETTERS, 2018, 295 : S104 - S105
  • [28] Mechanism-informed read-across assessment of skin sensitizers based on SkinSensDB
    Tung, Chun-Wei
    Wang, Chia-Chi
    Wang, Shan-Shan
    REGULATORY TOXICOLOGY AND PHARMACOLOGY, 2018, 94 : 276 - 282
  • [29] Quantifying Analogue Suitability for SAR-Based Read-Across Toxicological Assessment
    Lester, Cathy
    Byrd, ElLantae
    Shobair, Mahmoud
    Yan, Gang
    CHEMICAL RESEARCH IN TOXICOLOGY, 2023, : 230 - 242
  • [30] Approaches to support read-across for UVCB substances
    Rooseboom, M.
    Kamp, H.
    Kocabas, N. Aygun
    Synhaeve, N.
    Faulhammer, F.
    Rushton, E.
    van Ravenzwaay, B.
    Penman, M.
    TOXICOLOGY LETTERS, 2022, 368 : S260 - S260