Regulation of Bacterial Metabolism by Small RNAs Using Diverse Mechanisms

被引:77
|
作者
Bobrovskyy, Maksym [1 ]
Vanderpool, Carin K. [1 ]
机构
[1] Univ Illinois, Dept Microbiol, Urbana, IL 61801 USA
来源
关键词
Hfq; RNase E; riboswitch; SgrS; Spot; 42; CRC GLOBAL REGULATOR; CARBON CATABOLITE REPRESSION; SM-LIKE PROTEIN; CARBOHYDRATE PHOSPHOTRANSFERASE SYSTEMS; PSEUDOMONAS-FLUORESCENS CHA0; ESCHERICHIA-COLI MUTANTS; BINDING SMALL RNA; MESSENGER-RNA; BACILLUS-SUBTILIS; SOLUBLE-RNA;
D O I
10.1146/annurev-genet-111212-133445
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Bacteria live in many dynamic environments with alternating cycles of feast or famine that have resulted in the evolution of mechanisms to quickly alter their metabolic capabilities. Such alterations often involve complex regulatory networks that modulate expression of genes involved in nutrient uptake and metabolism. A great number of protein regulators of metabolism have been characterized in depth. However, our ever-increasing understanding of the roles played by RNA regulators has revealed far greater complexity to regulation of metabolism in bacteria. Here, we review the mechanisms and functions of selected bacterial RNA regulators and discuss their importance in modulating nutrient uptake as well as primary and secondary metabolic pathways.
引用
收藏
页码:209 / 232
页数:24
相关论文
共 50 条
  • [41] Bacterial Small Regulatory RNAs and Hfq Protein
    V. N. Murina
    A. D. Nikulin
    Biochemistry (Moscow), 2015, 80 : 1647 - 1654
  • [42] Bacterial small RNAs scoop up proteins
    Andrea Du Toit
    Nature Reviews Microbiology, 2014, 12 (7) : 460 - 460
  • [43] Integration of Bacterial Small RNAs in Regulatory Networks
    Nitzan, Mor
    Rehani, Rotem
    Margalit, Hanah
    ANNUAL REVIEW OF BIOPHYSICS, VOL 46, 2017, 46 : 131 - 148
  • [44] Impacts of Small RNAs and Their Chaperones on Bacterial Pathogenicity
    Djapgne, Louise
    Oglesby, Amanda G.
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2021, 11
  • [45] Origin, Evolution, and Loss of Bacterial Small RNAs
    Dutcher, H. Auguste
    Raghavan, Rahul
    MICROBIOLOGY SPECTRUM, 2018, 6 (02):
  • [46] Bacterial Small Regulatory RNAs and Hfq Protein
    Murina, V. N.
    Nikulin, A. D.
    BIOCHEMISTRY-MOSCOW, 2015, 80 (13) : 1647 - 1654
  • [47] Computational approaches for the discovery of bacterial small RNAs
    Kulkarni, Raw V.
    Kulkarni, Praj'na R.
    METHODS, 2007, 43 (02) : 131 - 139
  • [48] Bacterial Small RNAs in Mixed Regulatory Networks
    Brosse, Anais
    Guillier, Maude
    MICROBIOLOGY SPECTRUM, 2018, 6 (03):
  • [49] Noncoding RNAs in regulation of plant secondary metabolism
    Deng, Keyin
    Li, Ziwei
    Huang, Tengbo
    Huang, Jianzi
    PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2024, 211
  • [50] BACTERIAL METABOLISM AND ITS REGULATION
    VANDECAS.JP
    REVUE DE L INSTITUT FRANCAIS DU PETROLE ET ANNALES DES COMBUSTIBLES LIQUIDES, 1971, 26 (03): : 221 - &