Regulation of Bacterial Metabolism by Small RNAs Using Diverse Mechanisms

被引:77
|
作者
Bobrovskyy, Maksym [1 ]
Vanderpool, Carin K. [1 ]
机构
[1] Univ Illinois, Dept Microbiol, Urbana, IL 61801 USA
来源
关键词
Hfq; RNase E; riboswitch; SgrS; Spot; 42; CRC GLOBAL REGULATOR; CARBON CATABOLITE REPRESSION; SM-LIKE PROTEIN; CARBOHYDRATE PHOSPHOTRANSFERASE SYSTEMS; PSEUDOMONAS-FLUORESCENS CHA0; ESCHERICHIA-COLI MUTANTS; BINDING SMALL RNA; MESSENGER-RNA; BACILLUS-SUBTILIS; SOLUBLE-RNA;
D O I
10.1146/annurev-genet-111212-133445
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Bacteria live in many dynamic environments with alternating cycles of feast or famine that have resulted in the evolution of mechanisms to quickly alter their metabolic capabilities. Such alterations often involve complex regulatory networks that modulate expression of genes involved in nutrient uptake and metabolism. A great number of protein regulators of metabolism have been characterized in depth. However, our ever-increasing understanding of the roles played by RNA regulators has revealed far greater complexity to regulation of metabolism in bacteria. Here, we review the mechanisms and functions of selected bacterial RNA regulators and discuss their importance in modulating nutrient uptake as well as primary and secondary metabolic pathways.
引用
下载
收藏
页码:209 / 232
页数:24
相关论文
共 50 条
  • [1] Identification of small RNAs in diverse bacterial species
    Livny, Jonathan
    Waldor, Matthew K.
    CURRENT OPINION IN MICROBIOLOGY, 2007, 10 (02) : 96 - 101
  • [2] Insights into bacterial metabolism from small RNAs
    Papenfort, Kai
    Storz, Gisela
    CELL CHEMICAL BIOLOGY, 2024, 31 (09) : 1571 - 1577
  • [3] Role of Small Noncoding RNAs in Bacterial Metabolism
    Azhikina, T. L.
    Ignatov, D. V.
    Salina, E. G.
    Fursov, M. V.
    Kaprelyants, A. S.
    BIOCHEMISTRY-MOSCOW, 2015, 80 (13) : 1633 - 1646
  • [4] Role of Small Noncoding RNAs in Bacterial Metabolism
    T. L. Azhikina
    D. V. Ignatov
    E. G. Salina
    M. V. Fursov
    A. S. Kaprelyants
    Biochemistry (Moscow), 2015, 80 : 1633 - 1646
  • [5] Mechanisms by Which Small RNAs Affect Bacterial Activity
    Lei, L.
    Yang, Y.
    Wu, S.
    Ma, X.
    Mao, M.
    Hu, T.
    JOURNAL OF DENTAL RESEARCH, 2019, 98 (12) : 1315 - 1323
  • [6] Regulation of Transcription Termination of Small RNAs and by Small RNAs: Molecular Mechanisms and Biological Functions
    Chen, Jiandong
    Morita, Teppei
    Gottesman, Susan
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2019, 9
  • [7] Regulation outside the box: New mechanisms for small RNAs
    Froehlich, Kathrin S.
    Papenfort, Kai
    MOLECULAR MICROBIOLOGY, 2020, 114 (03) : 363 - 366
  • [8] Broadening the Definition of Bacterial Small RNAs: Characteristics and Mechanisms of Action
    Carrier, Marie-Claude
    Lalaouna, David
    Masse, Eric
    ANNUAL REVIEW OF MICROBIOLOGY, VOL 72, 2018, 72 : 141 - 161
  • [10] Diverse molecular mechanisms of transcription regulation by the bacterial alarmone ppGpp
    Travis, Brady A.
    Schumacher, Maria A.
    MOLECULAR MICROBIOLOGY, 2022, 117 (02) : 252 - 260