Aromatic SOFAST-HMBC for proteins at natural 13C abundance

被引:1
|
作者
Vallet, Alicia [1 ]
Favier, Adrien [1 ]
Brutscher, Bernhard [1 ]
机构
[1] Univ Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, France
关键词
SOFAST; Protein; Aromatics; Resonance assignment; Longitudinal relaxation optimization; Cryogenic probe; High field NMR; 2-DIMENSIONAL NMR EXPERIMENTS; RESONANCE ASSIGNMENT; SIDE-CHAINS; SPECTROSCOPY; RESIDUES; ACIDS;
D O I
10.1016/j.jmr.2019.01.009
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We propose here SOFAST-HMBC as a new complementary NMR tool for aromatic side chain assignment of protein samples at natural C-13 abundance. The characteristic peak patterns detected in SOFAST-HMBC for each aromatic side chain allow straightforward assignment of all protons and carbons (including quaternary ones) of the aromatic ring, and for tyrosine and phenylalanine, connection to the CB of the aliphatic chain. The performance of SOFAST-HMBC is demonstrated for three small proteins (7-14 kDa) at millimolar sample concentration using modern high-field NMR instruments equipped with cryogenically cooled probes. Despite the low amount of NMR-active C-13 nuclei in these samples, H-1-C-13 multiple-bond correlation spectra of good quality were obtained in reasonable experimental times of typically less than 24 h. (C) 2019 Elsevier Inc. All rights reserved.
引用
收藏
页码:95 / 102
页数:8
相关论文
共 50 条
  • [21] Natural 13C Abundance of Organic-Matter Pools in Haplic Chernozem
    Z. S. Artemyeva
    E. P. Zazovskaya
    E. S. Zasukhina
    E. V. Tsomaeva
    B. M. Kogut
    Moscow University Soil Science Bulletin, 2022, 77 (4) : 258 - 265
  • [22] Natural abundance solution 13C NMR studies of a phototropin with photoinduced polarization
    Eisenreich, Wolfgang
    Joshi, Monika
    Weber, Stefan
    Bacher, Adelbert
    Fischer, Markus
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (41) : 13544 - +
  • [23] Natural abundance solution 13C NMR studies of a phototropin with photoinduced polarization
    Eisenreich, Wolfgang
    Joshi, Monika
    Weber, Stefan
    Bacher, Adelbert
    Fischer, Markus
    Journal of the American Chemical Society, 2008, 130 (41): : 13544 - 13545
  • [24] Authentication of the origin of vanillin using quantitative natural abundance 13C NMR
    Tenailleau, EJ
    Lancelin, P
    Robins, RJ
    Akoka, S
    JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY, 2004, 52 (26) : 7782 - 7787
  • [25] Changes of natural 13C abundance in microbial biomass during litter decomposition
    Piao, H. C.
    Zhu, J. M.
    Liu, G. S.
    Liu, C. Q.
    Tao, F. X.
    APPLIED SOIL ECOLOGY, 2006, 33 (01) : 3 - 9
  • [26] BEST and SOFAST experiments for resonance assignment of histidine and tyrosine side chains in 13C/15N labeled proteins
    Nina Eleni Christou
    Bernhard Brutscher
    Journal of Biomolecular NMR, 2018, 72 : 115 - 124
  • [27] BEST and SOFAST experiments for resonance assignment of histidine and tyrosine side chains in 13C/15N labeled proteins
    Christou, Nina Eleni
    Brutscher, Bernhard
    JOURNAL OF BIOMOLECULAR NMR, 2018, 72 (3-4) : 115 - 124
  • [28] 1H Indirect Detected 13C Low-Abundance Single-Transition Correlation Spectroscopy (HICLASS)-13C Homonuclear Correlation at Natural Abundance
    George, Christy
    Chandrakumar, N.
    ORGANIC LETTERS, 2011, 13 (20) : 5448 - 5451
  • [29] Abundance anomaly of the 13C species of CCH
    Sakai, N.
    Saruwatari, O.
    Sakai, T.
    Takano, S.
    Yamamoto, S.
    ASTRONOMY & ASTROPHYSICS, 2010, 512
  • [30] NATURAL ABUNDANCE OF δ13C AND δ15N IN MANAGEMENT SYSTEMS CONSERVATION IN THE CERRADO
    Loss, Arcangelo
    Pereira, Marcos Gervasio
    Perin, Adriano
    Cunha dos Anjos, Lucia Helena
    BIOSCIENCE JOURNAL, 2014, 30 (03): : 604 - 615