A microfluidic approach for protein structure determination at room temperature via on-chip anomalous diffraction

被引:37
|
作者
Perry, Sarah L. [1 ]
Guha, Sudipto [1 ]
Pawate, Ashtamurthy S. [1 ]
Bhaskarla, Amrit [2 ]
Agarwal, Vinayak [3 ]
Nair, Satish K. [3 ]
Kenis, Paul J. A. [1 ]
机构
[1] Univ Illinois, Dept Chem & Biomol Engn, Urbana, IL USA
[2] Univ Illinois, Sch Mol & Cellular Biol, Urbana, IL USA
[3] Univ Illinois, Dept Biochem, Urbana, IL USA
关键词
CRYSTAL-STRUCTURE; MEMBRANE-PROTEINS; CRYSTALLIZATION; SYSTEM; PURIFICATION; PLATFORM;
D O I
10.1039/c3lc50276g
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We report a microfluidic approach for de novo protein structure determination via crystallization screening and optimization, as well as on-chip X-ray diffraction data collection. The structure of phosphonoacetate hydrolase (PhnA) has been solved to 2.11 angstrom via on-chip collection of anomalous data that has an order of magnitude lower mosaicity than what is typical for traditional structure determination methods.
引用
收藏
页码:3183 / 3187
页数:5
相关论文
共 50 条
  • [1] Room-temperature serial crystallography using a kinetically optimized microfluidic device for protein crystallization and on-chip X-ray diffraction
    Heymann, Michael
    Opthalage, Achini
    Wierman, Jennifer L.
    Akella, Sathish
    Szebenyi, Doletha M. E.
    Gruner, Sol M.
    Fraden, Seth
    IUCRJ, 2014, 1 : 349 - 360
  • [2] On-chip Crystallization and Large-Scale Serial Diffraction at Room Temperature
    Biju, Linta M.
    Wang, Cong
    Kang, Weijia
    Tom, Irin P.
    Kumarapperuma, Indika
    Yang, Xiaojing
    Ren, Zhong
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2022, (181):
  • [3] A microfluidic device for both on-chip dialysis protein crystallization and in situ X-ray diffraction
    Junius, Niels
    Jaho, Sofia
    Sallaz-Damaz, Yoann
    Borel, Franck
    Salmon, Jean-Baptiste
    Budayova-Spano, Monika
    LAB ON A CHIP, 2020, 20 (02) : 296 - 310
  • [4] Room-temperature serial crystallography using a kinetically optimized microfluidic device for protein crystallization and on-chip X-ray diffraction (vol 1, pg 349, 2014)
    Heymann, Michael
    Opathalage, Achini
    Wierman, Jennifer L.
    Akella, Sathish
    Szebenyi, Doletha M. E.
    Gruner, Sol M.
    Fraden, Seth
    IUCRJ, 2015, 2 : 601 - 601
  • [5] Nanoliter droplet-based microfluidic system for evaluating protein crystallization conditions with on-chip diffraction.
    Zheng, B
    Tice, JD
    Roach, LS
    Ismagilov, RF
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2004, 228 : U533 - U533
  • [6] Microfluidic swap structure to enhance on-chip liquid mixing
    Oellers, M.
    Bunge, F.
    Lucklum, F.
    Vinayaka, P. Papireddy
    Habben, C.
    Kirsch, M.
    van den Driesche, S.
    Vellekoop, M. J.
    2017 IEEE SENSORS, 2017, : 1706 - 1708
  • [7] Application of on-chip room-temperature protein crystallography to visualize the dynamics of structural changes
    Kapis, Svetlana
    Heymann, Michael
    Perbandt, Markus
    Chang, Guoqing
    Kaertner, Franz
    Betzel, Christian
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2015, 71 : S188 - S188
  • [8] An acoustic on-chip goniometer for room temperature macromolecular crystallography
    Burton, C. G.
    Axford, D.
    Edwards, A. M. J.
    Gildea, R. J.
    Morris, R. H.
    Newton, M. I.
    Orville, A. M.
    Prince, M.
    Topham, P. D.
    Docker, P. T.
    LAB ON A CHIP, 2017, 17 (24) : 4225 - 4230
  • [9] A new lanthanide complex for protein structure determination using anomalous diffraction
    Pompidor, Guillaume
    Maury, Olivier
    Vicat, Jean
    Kahn, Richard
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2006, 62 : S20 - S20
  • [10] Protein crystallization and structure determination at room temperature in the CrystalChip
    Pachl, Petr
    Coudray, Lena
    Vincent, Romain
    Nilles, Lea
    Scheer, Helene
    Ritzenthaler, Christophe
    Fejfarova, Adela
    Rezacova, Pavlina
    Engilberge, Sylvain
    Sauter, Claude
    FEBS OPEN BIO, 2024,