Segmentation and 3D Reconstruction of Microbial Biofilms

被引：1
|
作者：
Bouchet, A. [1 ]
Pastore, J. I. [1 ]
Di Meglio, L. G. [2 ]
Robuschi, L. [3 ]
Ballarin, V. [4 ]
机构：
[1] UNMdP, Fac Ingn, Grp Procesamiento Imagenes, CONICET, Buenos Aires, DF, Argentina
[2] UNMdP, CONICET, IIB, Buenos Aires, DF, Argentina
[3] INTEMA, Div Corros, Lab Bioelectroquim, CONICET, Buenos Aires, DF, Argentina
[4] UNMdP, Fac Ingn, Grp Procesamiento Imagenes, Buenos Aires, DF, Argentina
来源：
IEEE LATIN AMERICA TRANSACTIONS | 2013年 / 11卷 / 01期
关键词：
Biofilms; Mathematical Morphology; Segmentation; 3D Reconstruction;
D O I：
10.1109/TLA.2013.6502824
中图分类号：
TP [自动化技术、计算机技术];
学科分类号：
0812 ;
摘要：
Capability of microbial biofilms to form biofilms is really important in biotechnology industries, environmental applications and medical applications. Therefore, the study of the structure and development of these organisms is essential. In this paper we develop and implement an algorithm, based on Mathematical Morphology, to analyze the structure and growing of microbial biofilms. This algorithm allows segmentation of a stack of images acquired from in vivo observation of microorganisms, using an inverted phase contrast microscope. Finally, a 3D reconstruction for an efficient visualization of the structure and topography of biofilms is done.
引用
收藏
页码：324 / 328
页数：5
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