An extensive comparison of species-abundance distribution models

被引:56
|
作者
Baldridge, Elita [1 ,2 ]
Harris, David J. [3 ]
Xiao, Xiao [1 ,2 ,4 ,5 ]
White, Ethan P. [1 ,2 ,3 ,6 ]
机构
[1] Utah State Univ, Dept Biol, Logan, UT 84322 USA
[2] Utah State Univ, Ctr Ecol, Logan, UT 84322 USA
[3] Univ Florida, Dept Wildlife Ecol & Conservat, Gainesville, FL 32611 USA
[4] Univ Maine, Sch Biol & Ecol, Orono, ME USA
[5] Univ Maine, Senator George J Mitchell Ctr Sustainabil Solut, Orono, ME USA
[6] Univ Florida, Inst Informat, Gainesville, FL 32611 USA
来源
PEERJ | 2016年 / 4卷
基金
美国国家科学基金会;
关键词
Species-abundance distribution; Informatics; Commonness; Rarity; Citizen science; Animals; Plants; Community structure; MAXIMUM-ENTROPY; NEUTRAL THEORY; PATTERNS;
D O I
10.7717/peerj.2823
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A number of different models have been proposed as descriptions of the species abundance distribution (SAD). Most evaluations of these models use only one or two models, focus on only a single ecosystem or taxonomic group, or fail to use appropriate statistical methods. We use likelihood and AIC to compare the fit of four of the most widely used models to data on over 16,000 communities from a diverse array of taxonomic groups and ecosystems. Across all datasets combined the log series, Poisson lognormal, and negative binomial all yield similar overall fits to the data. Therefore, when correcting for differences in the number of parameters the log series generally provides the best fit to data. Within individual datasets some other distributions performed nearly as well as the log-series even after correcting for the number of parameters. The Zipf distribution is generally a poor characterization of the SAD.
引用
收藏
页数:14
相关论文
共 50 条
  • [41] Earthquake impacts on microcrustacean communities inhabiting groundwater-fed springs alter species-abundance distribution patterns
    Fattorini, Simone
    Di Lorenzo, Tiziana
    Galassi, Diana M. P.
    SCIENTIFIC REPORTS, 2018, 8
  • [42] Improving species distribution models: the value of data on abundance
    Howard, Christine
    Stephens, Philip A.
    Pearce-Higgins, James W.
    Gregory, Richard D.
    Willis, Stephen G.
    METHODS IN ECOLOGY AND EVOLUTION, 2014, 5 (06): : 506 - 513
  • [43] Niche-oriented species-abundance models: different approaches of their application to larval chironomid (Diptera) assemblages in a large river
    Fesl, C
    JOURNAL OF ANIMAL ECOLOGY, 2002, 71 (06) : 1085 - 1094
  • [44] ALTERATIONS TO THE RELATIVE SPECIES-ABUNDANCE OF ASCIDIANS AND BARNACLES IN A FOULING COMMUNITY DUE TO SCREENS
    MARSHALL, JI
    ROWE, FWE
    FISHER, RP
    SMITH, DF
    AUSTRALIAN JOURNAL OF MARINE AND FRESHWATER RESEARCH, 1980, 31 (02): : 147 - 153
  • [45] Observer error in grassland vegetation surveys: effects on species diversity metrics and species-abundance relationships
    Morrison, Lloyd W.
    Leis, Sherry A.
    DeBacker, Michael D.
    JOURNAL OF PLANT ECOLOGY, 2023, 16 (04)
  • [46] Contrasting effects of grassland management modes on species-abundance distributions of multiple groups
    Simons, Nadja K.
    Lewinsohn, Thomas
    Bluethgen, Nico
    Buscot, Francois
    Boch, Steffen
    Daniel, Rolf
    Gossner, Martin M.
    Jung, Kirsten
    Kaiser, Kristin
    Mueller, Joerg
    Prati, Daniel
    Renner, Swen C.
    Socher, Stephanie A.
    Sonnemann, Ilja
    Weiner, Christiane N.
    Werner, Michael
    Wubet, Tesfaye
    Wurst, Susanne
    Weisser, Wolfgang W.
    AGRICULTURE ECOSYSTEMS & ENVIRONMENT, 2017, 237 : 143 - 153
  • [47] PITFALL TRAPPING AND SPECIES-ABUNDANCE RELATIONSHIPS - A VALUE FOR CARABID BEETLES (COLEOPTERA, CARABIDAE)
    JAROSIK, V
    ACTA ENTOMOLOGICA BOHEMOSLOVACA, 1992, 89 (01): : 1 - 12
  • [48] Environmental fluctuations explain the universal decay of species-abundance correlations with phylogenetic distance
    Sireci, Matteo
    Munoz, Miguel A.
    Grilli, Jacopo
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2023, 120 (37)
  • [49] Population dynamic models generating the lognormal species abundance distribution
    Engen, S
    Lande, R
    MATHEMATICAL BIOSCIENCES, 1996, 132 (02) : 169 - 183
  • [50] Spatial semiparametric models improve estimates of species abundance and distribution
    Shelton, Andrew Olaf
    Thorson, James T.
    Ward, Eric J.
    Feist, Blake E.
    CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES, 2014, 71 (11) : 1655 - 1666