The complete chloroplast genome sequence ofSenna toraand phylogenetic analysis

被引：1
|
作者：
Xu, Qing [1 ]
Ma, Lirong [1 ]
Chen, Guo [2 ]
机构：
[1] Northwest Univ, Coll Life Sci, Xian, Peoples R China
[2] Fourth Mil Med Univ, Sch Pharm, Dept Biopharmaceut, Xian, Shaanxi, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词：
S; tora; chloroplast genome; phylogenetic analysis; genetic information;
D O I：
10.1080/23802359.2020.1781573
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete chloroplast genome sequence ofSenna torawas characterized from Illumina pair-end sequencing. The chloroplast genome ofS. torawas 161,050 bp in length, containing a large single-copy region (LSC) of 90,411 bp, a small single-copy region (SSC) of 18,537 bp, and two inverted repeat (IR) regions of 26,050 bp. The overall GC content is 36.20%, while the correponding values of the LSC, SSC, and IR regions are 64.5%, 69.4%, and 60.2%, respectively. The genome contains 129 complete genes, including 8 rRNAs, 37 tRNAs and 84 protein coding genes. The Neighbour-joining phylogenetic analysis showed thatS. toraandS. bicapsularisclustered together as sisters to otherSennaspecies.
引用
收藏
页码：3433 / 3435
页数：3
相关论文
共 50 条
  • [41] The complete chloroplast genome sequence of Dendrobium thyrsiflorum (Orchidaceae) and its phylogenetic analysis
    Zhu, Bin
    Luo, Xi
    Gao, Zuomin
    Feng, Qun
    Hu, Lijuan
    Weng, Qingbei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 4085 - 4086
  • [42] The complete chloroplast genome sequence of Lavandula dentata (Lamiaceae) and its phylogenetic analysis
    Li, Hui
    Li, Jingrui
    Bai, Hongtong
    Shi, Lei
    Wang, Huafang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2135 - 2136
  • [43] The complete chloroplast genome sequence of Malus prattii (Rosaceae) and its phylogenetic analysis
    Fan, Lu
    Qin, Ling
    Yan, Jie
    Mo, Chuanyuan
    Rong, Chunxiao
    Meng, Ying
    Zhang, Manrang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2171 - 2172
  • [44] Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)
    Zhang, Junyi
    Liao, Min
    Li, Xiong
    Xu, Bo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (04): : 681 - 682
  • [45] Complete chloroplast genome sequence of Sinojackia microcarpa (Styracaceae): comparative and phylogenetic analysis
    Zhong, Tailin
    Zhuo, Juan
    Chen, Danwei
    Vasupalli, Naresh
    Chu, Jiamiao
    Qian, Qixia
    BIOLOGIA, 2021, 76 (12) : 3891 - 3900
  • [46] The complete chloroplast genome sequence of Malus sieboldii (Rosaceae) and its phylogenetic analysis
    Lou, Gongli
    Wang, Shuai
    Zhang, Bin
    Cheng, Yueqin
    Wang, Hongwei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2170 - 2171
  • [47] The complete chloroplast genome sequence of Morella salicifolia (Myricaceae): characterization and phylogenetic analysis
    Karumuna, Josephine J.
    Yan, Dong-Ying
    Kyalo, Cornelius M.
    Li, Zhi-Zhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 963 - 964
  • [48] The complete chloroplast genome sequence and phylogenetic analysis of the medicinal plant Lysimachia hemsleyana
    Ying, Zhiqi
    Wang, Qirui
    Yu, Shuisheng
    Liao, Guanghui
    Ge, Yuqing
    Cheng, Rubin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3878 - 3879
  • [49] Characterization and phylogenetic analysis of the complete chloroplast genome sequence of Costus viridis (Costaceae)
    Li, Dong-Mei
    Wu, Wei
    Liu, Xiao-Fei
    Zhao, Chao-Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1118 - 1120
  • [50] The complete chloroplast genome sequence of Ziziphus attopensis (Rhamnaceae) and its phylogenetic analysis
    Li, Jia
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2828 - 2829
12345