Characterization and phylogenetic analysis of the complete chloroplast genome sequence of xerophyta retinervis (velloziaceae)

被引:1
|
作者
Zhang, Junyi [1 ,2 ]
Liao, Min [1 ,3 ]
Li, Xiong [1 ,3 ]
Xu, Bo [1 ,3 ]
机构
[1] Chinese Acad Sci, Chengdu Inst Biol, CAS Key Lab Mt Ecol Restorat & Bioresource Utiliz, Chengdu, Peoples R China
[2] Chongqing Normal Univ, Coll Life Sci, Chongqing, Peoples R China
[3] Univ Chinese Acad Sci, Coll Life Sci, Beijing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 04期
关键词
Chloroplast genome; phylogeny; Xerophyta retinervis;
D O I
10.1080/23802359.2022.2067500
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Xerophyta retinervis has great ornamental value and numerous traditional uses. This study reported its first complete chloroplast genome sequence, which was 155,109 bp in length, including a pair of inverted repeat regions (IRs) (27,093 bp), a small single-copy (SSC) region (17,385 bp), and a large single-copy (LSC) region (83,538bp). The chloroplast genome encoded 133 genes, including 87 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The total GC content of the chloroplast genome was 37.55%. The phylogenetic tree showed that X. retinervis was closely related to X. spekei.
引用
下载
收藏
页码:681 / 682
页数:2
相关论文
共 50 条
  • [1] The complete chloroplast genome sequence of Xerophyta spekei (Velloziaceae)
    Wanga, Vincent Okelo
    Dong, Xiang
    Oulo, Millicent Akinyi
    Munyao, Jacinta Ndunge
    Mkala, Elijah Mbandi
    Kirika, Paul
    Gituru, Robert Wahiti
    Hu, Guang-Wan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 100 - 101
  • [2] Characterization and phylogenetic analysis of the complete chloroplast genome sequence of Costus viridis (Costaceae)
    Li, Dong-Mei
    Wu, Wei
    Liu, Xiao-Fei
    Zhao, Chao-Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1118 - 1120
  • [3] The complete chloroplast genome sequence of Morella salicifolia (Myricaceae): characterization and phylogenetic analysis
    Karumuna, Josephine J.
    Yan, Dong-Ying
    Kyalo, Cornelius M.
    Li, Zhi-Zhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 963 - 964
  • [4] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Aster tataricus
    Shen, Xiaofeng
    Guo, Shuai
    Yin, Yu
    Zhang, Jingjing
    Yin, Xianmei
    Liang, Conglian
    Wang, Zhangwei
    Huang, Bingfeng
    Liu, Yanhong
    Xiao, Shuiming
    Zhu, Guangwei
    MOLECULES, 2018, 23 (10):
  • [5] Complete chloroplast genome sequence and phylogenetic analysis of Spathiphyllum 'Parrish'
    Liu, Xiao-Fei
    Zhu, Gen-Fa
    Li, Dong-Mei
    Wang, Xiao-Jing
    PLOS ONE, 2019, 14 (10):
  • [6] Complete Chloroplast Genome Sequence and Phylogenetic Analysis of Paeonia ostii
    Guo, Shuai
    Guo, Lili
    Zhao, Wei
    Xu, Jiang
    Li, Yuying
    Zhang, Xiaoyan
    Shen, Xiaofeng
    Wu, Mingli
    Hou, Xiaogai
    MOLECULES, 2018, 23 (02):
  • [7] Complete chloroplast genome sequence and phylogenetic analysis ofAnnona reticulata
    Niu, Ying-feng
    Li, Kai-Xiong
    Liu, Jin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3558 - 3560
  • [8] The complete chloroplast genome sequence ofChlorella vulgarisand phylogenetic analysis
    Wen, Yangmin
    Wan, Duanjing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2713 - 2715
  • [9] The complete chloroplast genome sequence of Veratrum oxysepalum and phylogenetic analysis
    Chen, Zi-Jian
    Liu, Jia-Jia
    Zhang, Ying-Min
    Qian, Zi-Gang
    Li, Guo-Dong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2015 - 2016
  • [10] Complete chloroplast genome sequence and phylogenetic analysis of Erysimum cheiranthoides
    Zhang, Qingde
    Du, Yingxue
    Bai, Shangyuan
    Yuan, Wangjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2920 - 2921