The complete chloroplast genome of Euphorbia prostrata (Euphorbiaceae)

被引:0
|
作者
Oh, Ami [1 ]
Kang, Eun Su [2 ]
Son, Dong-Chan [2 ]
Lee, Soo-Rang [1 ]
机构
[1] Chosun Univ, Dept Biol Educ, Gwangju 61452, South Korea
[2] Korea Natl Arboretum, Div Forest Biodivers, Pochon, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 02期
关键词
Euphorbia; euphorbia prostrata; Euphorbiaceae; phylogenetic analysis; plastome; COMPLETE PLASTOME SEQUENCE; MOLECULAR PHYLOGENETICS; CLASSIFICATION; CROTON;
D O I
10.1080/23802359.2024.2313039
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Euphorbia prostrata Aiton 1789, an annual herb, is native to tropical and subtropical Americas and was introduced into many parts of the Old-World including Korea. We determined the genomic characteristics of the complete chloroplast genome of E. prostrata with a de novo assembly strategy. The complete chloroplast genome was 162,858 bp long, and harbored 86 protein coding, 37 tRNA and 8 rRNA. The genome showed the typical quadripartite structure consisting of a large single copy (LSC) (90,580 bp), a small single copy (SSC) (18,570 bp) and a pair of inverted repeats (IRs) (26,854 bp). The phylogenetic tree inferred from chloroplast genomes of 25 taxa, which belong to Euphorbiaceae indicated that the Euphorbia is a monophyletic group and E. prostrata is closely related with E. humifusa, E. thymifolia and E. hirta, forming a well-supported clade. Our findings can be valuable for understanding the phylogenetic relationships and the evolution in Euphorbiaceae and will provide basic information for future studies on E. prostrata from genomic perspective.
引用
收藏
页码:267 / 271
页数:5
相关论文
共 50 条
  • [41] The complete chloroplast genome of Panicum miliaceum
    Cao, Xiaoning
    Wang, Junjie
    Wang, Haigang
    Liu, Sichen
    Chen, Ling
    Tian, Xiang
    Qin, Huibin
    Wang, Lun
    Na, Xiaofan
    Qiao, Zhijun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (01): : 43 - 45
  • [42] The complete chloroplast genome of Bromus biebersteinii
    Du, Wenxuan
    Yang, Junfeng
    Pang, Yongzhen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 2052 - 2053
  • [43] The complete chloroplast genome of Agave angustifolia
    Qin, Xu
    Yang, Xinli
    Huang, Xing
    Jin, Gan
    Yang, Xiangyan
    Wu, Mi
    Chen, Tao
    Yi, Kexian
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3236 - 3237
  • [44] The complete chloroplast genome of Styrax japonicus
    Xu, Zheng-Zhao
    Zhang, Cui-Ping
    Jiang, Xin-Qiang
    Guo, Xiao
    Li, Wen-Qing
    Liu, Qing-Hua
    Wang, Kui-Ling
    Wei, Li
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 81 - 82
  • [45] The complete chloroplast genome of Anoectochilus roxburghii
    Zeng, Xu
    Liu, Mengmeng
    Li, Yuanyuan
    Meng, Zhixia
    Guo, Shunxing
    MITOCHONDRIAL DNA PART A, 2016, 27 (06) : 4264 - 4265
  • [46] The complete chloroplast genome of Chimonobambusa hejiangensis
    Liu, Yun-Ke
    Liu, Wei
    Xiao, Qian-Gang
    Zeng, Zhen
    Zhuang, Li
    Zhang, Ting-Hao
    Zhang, Jun
    Huang, Qian-Ying
    Wang, Bao-Xin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (07): : 1824 - 1825
  • [47] The complete chloroplast genome of Sargassum fusiforme
    Liu, Tao
    Cui, Yutong
    Jia, Xuli
    Chen, Binbin
    Ma, Zengling
    Zou, Huixi
    Wang, Shengqin
    Wu, Mingjiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 576 - 577
  • [48] The complete chloroplast genome of Swertia cordata
    Huang, Li
    Chen, Chunlin
    Yang, Qiao
    Yang, Wenjie
    Hu, Quanjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3818 - 3819
  • [49] The complete chloroplast genome of Syzygium acuminatissimum
    Zeng, Feng
    Deng, Yanwen
    Liu, Xiaozhou
    Zhu, Xuanxi
    Tan, Guangwen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (01): : 127 - 128
  • [50] The complete chloroplast genome of Bothriochloa ischaemum
    Li, Yu-ying
    Xu, Hong-yu
    Zhong, Hua
    Yang, Zhi-qing
    Dong, Kuan-hu
    Xia, Fang-shan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (05): : 844 - 845