Complete chloroplast genome and phylogenetic analysis of Meliosma oldhamii Miq. ex Maxim. (Sabiaceae)

被引:0
|
作者
Cheng, Yao [1 ,2 ]
Xu, Xiaogang [1 ,2 ]
Tong, Lili [1 ,3 ]
Tian, Lu [1 ,2 ]
Xia, Chongli [3 ]
Yu, Xunlin [4 ]
机构
[1] Nanjing Forestry Univ, Coll Biol & Environm, Key Lab State Forestry & Grassland Adm Subtrop For, Coinnovat Ctr Sustainable Forestry Southern China, Nanjing, Peoples R China
[2] State Environm Protect Sci Observat & Res Stn Ecol, Nanping, Peoples R China
[3] Jinling Inst Technol, Sch Hort & Landscape Architecture, Nanjing, Peoples R China
[4] Cent South Univ Forestry & Technol, Coll Forestry, Changsha, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2023年 / 8卷 / 11期
关键词
Meliosma oldhamii; complete chloroplast genome; phylogenetic analysis; Sabiaceae;
D O I
10.1080/23802359.2023.2281034
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Meliosma oldhamii Miq. is a deciduous arbor and a member of Sabiaceae. It is one of the rare and protected plants with outstanding ornamental and economic value in Jiangsu, China. In addition to the resource values indicated above, there are numerous other elements that require additional research, including the chloroplast (cp) genomic information. In this work, the complete cp genome sequence of M. oldhamii was assembled and characterized for the first time. The complete cp genome of M. oldhamii was 159,950 base pair (bp) in length, including a large single-copy (LSC) region of 87,147 bp, a small single-copy (SSC) region of 18,015 bp, and the inverted repeats (IRs) region of 27,394 bp. It contains 131 genes, including 37 tRNA genes, eight rRNA genes, 85 protein-coding genes, and one pseudogene. The overall GC content of M. oldhamii cp genome was 37.95%. The placement of M. oldhamii in the phylogenetic tree constructed using the complete cp genome is largely congruent with previous studies. The clustering of Meliosma is non-monophyletic, aligns more closely with existing morphological taxonomic studies, thereby enhancing the scholarly and scientific nature of this research.
引用
收藏
页码:1306 / 1310
页数:5
相关论文
共 50 条
  • [21] The complete chloroplast genome and phylogenetic analysis of Elaeagnus oldhamii (Elaeagnaceae) from Fujian, southeastern China
    Chen, Yuan
    Zheng, Ying
    Shi, Gongning
    Wang, Pengfei
    Lin, Yanxiang
    Huang, Mingqing
    Zheng, Yanfang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (01): : 109 - 113
  • [22] The complete chloroplast genome of Petasites japonicus (Siebold & Zucc.) Maxim. (Asteraceae)
    Hashimoto, Tamaki
    Tsubota, Hiromi
    Shimamura, Masaki
    Inoue, Yuya
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12): : 3503 - 3505
  • [23] Characterization of the Evolutionary Pressure on Anisodus tanguticus Maxim. with Complete Chloroplast Genome Sequence
    Zhou, Dangwei
    Mehmood, Furrukh
    Lin, Pengcheng
    Cheng, Tingfeng
    Wang, Huan
    Shi, Shenbo
    Zhang, Jinkui
    Meng, Jing
    Zheng, Kun
    Poczai, Peter
    GENES, 2022, 13 (11)
  • [24] The complete chloroplast genome of Saussurea medusa maxim. (Asteraceae), an alpine Tibetan herb
    Wei, Yongsheng
    Zhang, Zhiwei
    Wang, Changhua
    Su, Yan
    Ye, Chenjuan
    Pan, Rui
    Liu, Xiang
    Qu, Xianyou
    Lan, Xiaozhong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3144 - 3145
  • [25] The complete chloroplast genome of Plagiorhegma dubia Maxim., a traditional Chinese medicinal herb
    Wang, Caihong
    Wang, Ying
    Liang, Qiong
    Yang, Tae-Jin
    Li, Zhilin
    Zhang, Yanjun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 112 - 114
  • [26] The complete chloroplast genome sequence of medicinal plant, Daphne tangutica Maxim. (Thymelaeaceae)
    Yan, Fang
    Wang, Qin-Li
    Zhang, Ya-Juan
    Zhang, Chun-Mei
    Chen, Ye
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1776 - 1777
  • [27] The complete chloroplast genome sequence of the medicinal plantGonostegia hirta(Bl.) Miq. (Urticaceae)
    Zhao, Feiya
    Tao, Aien
    Qian, Jinfu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 3403 - 3404
  • [28] The complete chloroplast genome sequence of Xylosma racemosa (Siebold & Zucc.) Miq. (Salicaceae)
    Tong, Lili
    Tian, Lu
    Xu, Xiaogang
    Xia, Chongli
    Cheng, Yao
    Jiang, Xiaoyu
    Wang, Hongchao
    Tian, Yukun
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2975 - 2976
  • [29] Comparative genome analysis revealed gene inversions, boundary expansions and contractions, and gene loss in the Stemona sessilifolia (Miq.) Miq. chloroplast genome
    Liu, Jingting
    Jiang, Mei
    Chen, Haimei
    Liu, Yu
    Liu, Chang
    Wu, Wuwei
    PLOS ONE, 2021, 16 (06):
  • [30] The complete chloroplast genome sequence of Asarum sieboldii Miq. (Aristolochiaceae), a medicinal plant in Korea
    Lim, Chae Eun
    Lee, Sang-Choon
    So, Soonku
    Han, Su-Min
    Choi, Ji-Eun
    Lee, Byoung-Yoon
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 118 - 119