Learning molecular dynamics: predicting the dynamics of glasses by a machine learning simulator

被引:7
|
作者
Liu, Han [1 ]
Huang, Zijie [2 ]
Schoenholz, Samuel S. [3 ]
Cubuk, Ekin D. [3 ]
Smedskjaer, Morten M. [4 ]
Sun, Yizhou [2 ]
Wang, Wei [2 ]
Bauchy, Mathieu [5 ]
机构
[1] Sichuan Univ, Coll Polymer Sci & Engn, SOlids inFormaT AI Lab SOFT AI Lab, Chengdu 610065, Peoples R China
[2] Univ Calif Los Angeles, Dept Comp Sci, Los Angeles, CA 90095 USA
[3] Google Res, Brain Team, Mountain View, CA 94043 USA
[4] Aalborg Univ, Dept Chem & Biosci, DK-9220 Aalborg, Denmark
[5] Univ Calif Los Angeles, Dept Civil & Environm Engn, Phys AmoRphous & Inorgan Solids Lab PARISlab, Los Angeles, CA 90095 USA
基金
美国国家科学基金会;
关键词
POTENTIALS; MATTER;
D O I
10.1039/d3mh00028a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Many-body dynamics of atoms such as glass dynamics is generally governed by complex (and sometimes unknown) physics laws. This challenges the construction of atom dynamics simulations that both (i) capture the physics laws and (ii) run with little computation cost. Here, based on graph neural network (GNN), we introduce an observation-based graph network (OGN) framework to "bypass all physics laws" to simulate complex glass dynamics solely from their static structure. By taking the example of molecular dynamics (MD) simulations, we successfully apply the OGN to predict atom trajectories evolving up to a few hundred timesteps and ranging over different families of complex atomistic systems, which implies that the atom dynamics is largely encoded in their static structure in disordered phases and, furthermore, allows us to explore the capacity of OGN simulations that is potentially generic to many-body dynamics. Importantly, unlike traditional numerical simulations, the OGN simulations bypass the numerical constraint of small integration timestep by a multiplier of & GE;5 to conserve energy and momentum until hundreds of timesteps, thus leapfrogging the execution speed of MD simulations for a modest timescale.
引用
收藏
页码:3416 / 3428
页数:13
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