Multifactorial epigenomic profiling of six chromatin states in single cells

被引:0
|
作者
Lochs, Silke J. A. [1 ]
Kind, Jop [1 ]
机构
[1] Hubrecht Inst, Utrecht, Netherlands
关键词
D O I
10.1038/s41592-023-02091-8
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We developed MAbID, a method for combined genomic profiling of histone modifications and chromatin-binding proteins in single cells, enabling researchers to study the interconnectivity between gene-regulatory mechanisms. We demonstrated MAbID's implementation in profiling multifactorial changes in chromatin signatures during in vitro neural differentiation and in primary mouse bone marrow tissue.
引用
收藏
页码:20 / 21
页数:2
相关论文
共 50 条
  • [31] A microfluidic device for epigenomic profiling using 100 cells
    Cao, Zhenning
    Chen, Changya
    He, Bing
    Tan, Kai
    Lu, Chang
    NATURE METHODS, 2015, 12 (10) : 959 - 962
  • [32] A microfluidic device for epigenomic profiling using 100 cells
    Zhenning Cao
    Changya Chen
    Bing He
    Kai Tan
    Chang Lu
    Nature Methods, 2015, 12 : 959 - 962
  • [33] Multiplexed single-cell profiling of chromatin states a genomic loci by expansion microscopy
    Woodworth, Marcus A.
    Ng, Kenneth K. H.
    Halpern, Aaron R.
    Pease, Nicholas A.
    Nguyen, Phuc H. B.
    Kueh, Hao Yuan
    Vaughan, Joshua C.
    NUCLEIC ACIDS RESEARCH, 2021, 49 (14) : E82 - E82
  • [34] Profiling spatial enrichment of chromatin marks suggests an additional epigenomic dimension in gene regulation
    Chica, Claudia
    Szarzynska, Bogna
    Chen-Min-Tao, Romy
    Duvernois-Berthet, Evelyne
    Kassam, Mohamed
    Colot, Vincent
    Roudier, Francois
    FRONTIERS IN LIFE SCIENCE, 2013, 7 (1-2): : 80 - 87
  • [35] Characterization and Optimization of Multiomic Single-Cell Epigenomic Profiling
    Sandoval, Leticia
    Ismail, Wazim Mohammed
    Mazzone, Amelia
    Dumbrava, Mihai
    Fernandez, Jenna
    Munankarmy, Amik
    Lasho, Terra
    Binder, Moritz
    Simon, Vernadette
    Kim, Kwan Hyun
    Chia, Nicholas
    Lee, Jeong-Heon
    Weroha, S. John
    Patnaik, Mrinal
    Gaspar-Maia, Alexandre
    GENES, 2023, 14 (06)
  • [36] Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
    Buenrostro, Jason D.
    Giresi, Paul G.
    Zaba, Lisa C.
    Chang, Howard Y.
    Greenleaf, William J.
    NATURE METHODS, 2013, 10 (12) : 1213 - +
  • [37] Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
    Jason D Buenrostro
    Paul G Giresi
    Lisa C Zaba
    Howard Y Chang
    William J Greenleaf
    Nature Methods, 2013, 10 : 1213 - 1218
  • [38] Joint profiling of drug-chromatin binding and epigenetic landscapes in single cells
    Marchal, Iris
    NATURE BIOTECHNOLOGY, 2024, 42 (08) : 1182 - 1182
  • [39] A MOUSE MODEL WITH HIGH CLONAL BARCODE DIVERSITY FOR JOINT LINEAGE, TRANSCRIPTOMIC, AND EPIGENOMIC PROFILING IN SINGLE CELLS
    Li, Li
    Bowling, Sarah
    Wang, Shouwen
    Camargo, Fernando
    EXPERIMENTAL HEMATOLOGY, 2023, 124 : S44 - S44
  • [40] Spatially resolved epigenomic profiling of single cells in complex tissues (vol 185, pg 4448, 2022)
    Lu, Tian
    Ang, Cheen Euong
    Zhuang, Xiaowei
    CELL, 2023, 186 (10) : 2275 - 2279