TOPOLOGICAL LEARNING FOR BRAIN NETWORKS

被引:0
|
作者
Songdechakraiwut, Tanannun [1 ]
Chung, Moo K. [1 ]
机构
[1] Univ Wisconsin Madison, Dept Biostat & Med Informat, Madison, WI 53706 USA
来源
ANNALS OF APPLIED STATISTICS | 2023年 / 17卷 / 01期
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
  Topological data analysis; persistent homology; topological learning; Wasserstein distance; birth-death decomposition; twin brain imaging study; PERSISTENT HOMOLOGY ANALYSIS; GRAPH-THEORETICAL ANALYSIS; HUMAN CEREBRAL-CORTEX; FUNCTIONAL CONNECTIVITY; WORKING-MEMORY; FRECHET MEANS; HEAD MOTION; MRI; REGISTRATION; CLASSIFICATION;
D O I
10.1214/22-AOAS1633
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
This paper proposes a novel topological learning framework that integrates networks of different sizes and topology through persistent homology. Such challenging task is made possible through the introduction of a computationally efficient topological loss. The use of the proposed loss bypasses the intrinsic computational bottleneck associated with matching networks. We validate the method in extensive statistical simulations to assess its effectiveness when discriminating networks with different topology. The method is further demonstrated in a twin brain imaging study where we determine if brain networks are genetically heritable. The challenge here is due to the difficulty of overlaying the topologically different functional brain networks obtained from resting-state functional MRI onto the template structural brain network obtained through diffusion MRI.
引用
收藏
页码:403 / 433
页数:31
相关论文
共 50 条
  • [41] Disrupted topological organization of structural brain networks in childhood absence epilepsy
    Qiu, Wenchao
    Yu, Chuanyong
    Gao, Yuan
    Miao, Ailiang
    Tang, Lu
    Huang, Shuyang
    Jiang, Wenwen
    Sun, Jintao
    Xiang, Jing
    Wang, Xiaoshan
    SCIENTIFIC REPORTS, 2017, 7
  • [42] Topological correlations of structural and functional networks in patients with traumatic brain injury
    Caeyenberghs, Karen
    Leemans, Alexander
    Leunissen, Inge
    Michiels, Karla
    Swinnen, Stephan P.
    FRONTIERS IN HUMAN NEUROSCIENCE, 2013, 7
  • [43] Topological state-space estimation of functional human brain networks
    Chung, Moo K.
    Huang, Shih-Gu
    Carroll, Ian C.
    Calhoun, Vince D.
    Goldsmith, H. Hill
    PLOS COMPUTATIONAL BIOLOGY, 2024, 20 (05)
  • [44] The Abnormality of Topological Asymmetry in Hemispheric Brain Anatomical Networks in Bipolar Disorder
    Wang, Bin
    Li, Ting
    Zhou, Mengni
    Zhao, Shuo
    Niu, Yan
    Wang, Xin
    Yan, Ting
    Cao, Rui
    Xiang, Jie
    Li, Dandan
    FRONTIERS IN NEUROSCIENCE, 2018, 12
  • [45] Altered topological patterns of brain functional networks in Crohn's disease
    Liu, Peng
    Li, Ru
    Bao, Chunhui
    Wei, Ying
    Fan, Yingying
    Liu, Yanfei
    Wang, Geliang
    Wu, Huangan
    Qin, Wei
    BRAIN IMAGING AND BEHAVIOR, 2018, 12 (05) : 1466 - 1478
  • [46] Altered topological patterns of brain functional networks in Crohn’s disease
    Peng Liu
    Ru Li
    Chunhui Bao
    Ying Wei
    Yingying Fan
    Yanfei Liu
    Geliang Wang
    Huangan Wu
    Wei Qin
    Brain Imaging and Behavior, 2018, 12 : 1466 - 1478
  • [47] Frequency Dependent Topological Patterns of Resting-State Brain Networks
    Qian, Long
    Zhang, Yi
    Zheng, Li
    Shang, Yuqing
    Gao, Jia-Hong
    Liu, Yijun
    PLOS ONE, 2015, 10 (04):
  • [48] Topological data analysis of human brain networks through order statistics
    Das, Soumya
    Anand, D. Vijay
    Chung, Moo K.
    PLOS ONE, 2023, 18 (03):
  • [49] Disrupted topological organization of structural brain networks in childhood absence epilepsy
    Wenchao Qiu
    Chuanyong Yu
    Yuan Gao
    Ailiang Miao
    Lu Tang
    Shuyang Huang
    Wenwen Jiang
    Jintao Sun
    Jing Xiang
    Xiaoshan Wang
    Scientific Reports, 7
  • [50] Exact Topological Inference for Paired Brain Networks via Persistent Homology
    Chung, Moo K.
    Villalta-Gil, Victoria
    Lee, Hyekyoung
    Rathouz, Paul J.
    Lahey, Benjamin B.
    Zald, David H.
    INFORMATION PROCESSING IN MEDICAL IMAGING (IPMI 2017), 2017, 10265 : 299 - 310