Identification of key genes and pathways in adrenocortical carcinoma: evidence from bioinformatic analysis

被引:1
|
作者
Yin, Mengsha [1 ]
Wang, Yao [2 ]
Ren, Xinhua [1 ]
Han, Mingyue [1 ]
Li, Shanshan [1 ]
Liang, Ruishuang [1 ]
Wang, Guixia [1 ]
Gang, Xiaokun [1 ]
机构
[1] First Hosp Jilin Univ, Dept Endocrinol & Metab, Changchun, Peoples R China
[2] Second Hosp Jilin Univ, Dept Orthoped, Changchun, Peoples R China
来源
基金
中国国家自然科学基金;
关键词
adrenocortical carcinoma; gene expression omnibus; differentially expressed genes; protein-protein interaction; Kaplan-Meier curve; ADJUVANT RADIOTHERAPY; THERAPEUTIC TARGET; EXPRESSION; EFFICACY; P53; INHIBITOR; PROGNOSIS; ALISERTIB; MUTATION; CANCER;
D O I
10.3389/fendo.2023.1250033
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Adrenocortical carcinoma (ACC) is a rare endocrine malignancy with poor prognosis. The disease originates from the cortex of adrenal gland and lacks effective treatment. Efforts have been made to elucidate the pathogenesis of ACC, but the molecular mechanisms remain elusive. To identify key genes and pathways in ACC, the expression profiles of GSE12368, GSE90713 and GSE143383 were downloaded from the Gene Expression Omnibus (GEO) database. After screening differentially expressed genes (DEGs) in each microarray dataset on the basis of cut-off, we identified 206 DEGs, consisting of 72 up-regulated and 134 down-regulated genes in three datasets. Function enrichment analyses of DEGs were performed by DAVID online database and the results revealed that the DEGs were mainly enriched in cell cycle, cell cycle process, mitotic cell cycle, response to oxygen-containing compound, progesterone-mediated oocyte maturation, p53 signaling pathway. The STRING database was used to construct the protein-protein interaction (PPI) network, and modules analysis was performed using Cytoscape. Finally, we filtered out eight hub genes, including CDK1, CCNA2, CCNB1, TOP2A, MAD2L1, BIRC5, BUB1 and AURKA. Biological process analysis showed that these hub genes were significantly enriched in nuclear division, mitosis, M phase of mitotic cell cycle and cell cycle process. Violin plot, Kaplan-Meier curve and stage plot of these hub genes confirmed the reliability of the results. In conclusion, the results in this study provided reliable key genes and pathways for ACC, which will be useful for ACC mechanisms, diagnosis and candidate targeted treatment.
引用
收藏
页数:12
相关论文
共 50 条
  • [21] Identification of key biomarkers associated with development and prognosis in patients with ovarian carcinoma: evidence from bioinformatic analysis
    Shen, Jiayu
    Yu, Shuqian
    Sun, Xiwen
    Yin, Meichen
    Fei, Jing
    Zhou, Jianwei
    JOURNAL OF OVARIAN RESEARCH, 2019, 12 (01)
  • [22] Common gene signatures and key pathways in hypopharyngeal and esophageal squamous cell carcinoma Evidence from bioinformatic analysis
    Zhou, Rui
    Liu, Denghua
    Zhu, Jing
    Zhang, Tao
    MEDICINE, 2020, 99 (42) : E22434
  • [23] Identification of key pathways and genes in nasopharyngeal carcinoma using bioinformatics analysis
    Zhu, Hong-Ming
    Fei, Qian
    Qian, Lu-Xi
    Liu, Bao-Ling
    He, Xia
    Yin, Li
    ONCOLOGY LETTERS, 2019, 17 (05) : 4683 - 4694
  • [24] Identification of key genes and pathways in hepatocellular carcinoma A preliminary bioinformatics analysis
    Wu, Min
    Liu, Zhaobo
    Zhang, Aiying
    Li, Ning
    MEDICINE, 2019, 98 (05)
  • [25] Identification of Hub Genes in Hemifacial Microsomia: Evidence From Bioinformatic Analysis
    Zhao, Shanbaga
    Sun, Pengfei
    Li, Xiyuan
    Xu, Xi
    Peng, Qili
    Shu, Kaiyi
    Ma, Lunkun
    Liang, Yingxiang
    Liu, Bingyang
    Zhang, Zhiyong
    JOURNAL OF CRANIOFACIAL SURGERY, 2022, 33 (02) : E145 - E149
  • [26] Identification of prognostic metabolic genes in adrenocortical carcinoma and establishment of a prognostic nomogram A bioinformatic study
    Chen, Qing
    Ren, Ziyu
    Liu, Dongfang
    Jin, Zongrui
    Wang, Xuan
    Zhang, Rui
    Liu, Qicong
    Cheng, Wei
    MEDICINE, 2021, 100 (50) : E27864
  • [27] Bioinformatic identification of key genes and analysis of prognostic values in clear cell renal cell carcinoma
    Luo, Ting
    Chen, Xiaoyi
    Zeng, Shufei
    Guan, Baozhang
    Hu, Bo
    Meng, Yu
    Liu, Fanna
    Wong, Taksui
    Lu, Yongpin
    Yun, Chen
    Hocher, Berthold
    Yin, Lianghong
    ONCOLOGY LETTERS, 2018, 16 (02) : 1747 - 1757
  • [28] Identification of genes and pathways associated with endometriosis using bioinformatic analysis
    Huang, Yaxiong
    Zhang, Yuanzhen
    Li, Bin
    Ke, Lina
    INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE, 2020, 13 (09): : 6626 - 6634
  • [29] Identification of special key genes for alcohol-related hepatocellular carcinoma through bioinformatic analysis
    Zhang, Xiuzhi
    Kang, Chunyan
    Li, Ningning
    Liu, Xiaoli
    Zhang, Jinzhong
    Gao, Fenglan
    Dai, Liping
    PEERJ, 2019, 7
  • [30] Identification of key genes and pathways in regulating immune-induced diseases of dendritic cells by bioinformatic analysis
    Zheng, Yang
    Zheng, Xianghui
    Li, Shuang
    Zhang, Hanlu
    Liu, Mingyang
    Yang, Qingyuan
    Zhang, Maomao
    Sun, Yong
    Wu, Jian
    Yu, Bo
    MOLECULAR MEDICINE REPORTS, 2018, 17 (06) : 7585 - 7594