High number of candidate gene variants are identified as disease-causing in a period of 4 years

被引:2
|
作者
Hills, Sonia [1 ,2 ]
Li, Qifei [1 ,2 ,3 ,4 ]
Madden, Jill A. [1 ,2 ]
Genetti, Casie A. [1 ,2 ]
Brownstein, Catherine A. [1 ,2 ,5 ]
Schmitz-Abe, Klaus [1 ,2 ,3 ,4 ,5 ,6 ]
Beggs, Alan H. [1 ,2 ,5 ,6 ]
Agrawal, Pankaj B. [1 ,2 ,3 ,4 ,7 ]
机构
[1] Boston Childrens Hosp, Div Genet & Genom, Boston, MA USA
[2] Boston Childrens Hosp, Manton Ctr Orphan Dis Res, Boston, MA USA
[3] Univ Miami, Dept Pediat, Div Neonatol, Miller Sch Med, Miami, FL USA
[4] Jackson Hlth Syst, Miami, FL USA
[5] Harvard Med Sch, Dept Pediat, Boston, MA USA
[6] Broad Inst MIT & Harvard, Cambridge, MA USA
[7] Univ Miami, Div Neonatol, Miller Sch Med, Miami, FL 33136 USA
基金
美国国家卫生研究院;
关键词
candidate gene variants; clinical exome reanalysis; gene-disease association; rare disease; PATHOGENICITY;
D O I
10.1002/ajmg.a.63509
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Advances in bioinformatic tools paired with the ongoing accumulation of genetic knowledge and periodic reanalysis of genomic sequencing data have led to an improvement in genetic diagnostic rates. Candidate gene variants (CGVs) identified during sequencing or on reanalysis but not yet implicated in human disease or associated with a phenotypically distinct condition are often not revisited, leading to missed diagnostic opportunities. Here, we revisited 33 such CGVs from our previously published study and determined that 16 of them are indeed disease-causing (novel or phenotype expansion) since their identification. These results emphasize the need to focus on previously identified CGVs during sequencing or reanalysis and the importance of sharing that information with researchers around the world, including relevant functional analysis to establish disease causality.
引用
收藏
页数:9
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