Transition-path sampling for run-and-tumble particles

被引:0
|
作者
Kiechl, Thomas [1 ]
Franosch, Thomas [1 ]
Caraglio, Michele [1 ]
机构
[1] Univ Innsbruck, Inst Theoret Phys, Technikerstr 21A, A-6020 Innsbruck, Austria
基金
奥地利科学基金会;
关键词
TIMES;
D O I
10.1103/PhysRevE.110.054121
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
We elaborate and validate a generalization of the renowned transition-path-sampling algorithm for a paradigmatic model of active particles, namely, the run-and-tumble particles. Notwithstanding the nonequilibrium character of these particles, we show how the consequent lack of the microscopical reversibility property, which is usually required by transition-path sampling, can be circumvented by identifying reasonable backward dynamics with a well-defined path-probability density. Our method is then applied to characterize the structure and kinetics of rare transition pathways undergone by run-and-tumble particles having to cross a potential barrier in order to find a target.
引用
收藏
页数:14
相关论文
共 50 条
  • [21] Long time behavior of run-and-tumble particles in two dimensions
    Santra, Ion
    Basu, Urna
    Sabhapandit, Sanjib
    JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2023, 2023 (03):
  • [22] Intuitive view of entropy production of ideal run-and-tumble particles
    Frydel, Derek
    PHYSICAL REVIEW E, 2022, 105 (03)
  • [23] Run-and-tumble particles in two dimensions: Marginal position distributions
    Santra, Ion
    Basu, Urna
    Sabhapandit, Sanjib
    PHYSICAL REVIEW E, 2020, 101 (06)
  • [24] Run-and-tumble particles in slit geometry as a splitting probability problem
    Frydel, Derek
    PHYSICS OF FLUIDS, 2024, 36 (11)
  • [25] Run-and-Tumble Particles with Hydrodynamics: Sedimentation, Trapping, and Upstream Swimming
    Nash, R. W.
    Adhikari, R.
    Tailleur, J.
    Cates, M. E.
    PHYSICAL REVIEW LETTERS, 2010, 104 (25)
  • [26] Run-and-tumble dynamics of self-propelled particles in confinement
    Elgeti, Jens
    Gompper, Gerhard
    EPL, 2015, 109 (05)
  • [27] Active transport of a passive colloid in a bath of run-and-tumble particles
    Dhar, Tanumoy
    Saintillan, David
    SCIENTIFIC REPORTS, 2024, 14 (01):
  • [28] Orthogonal run-and-tumble walks
    Angelani, Luca
    JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2022, 2022 (12):
  • [29] Transition-path sampling of β-hairpin folding
    Bolhuis, PG
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (21) : 12129 - 12134
  • [30] First-passage time of run-and-tumble particles with noninstantaneous resetting
    Tucci, Gennaro
    Gambassi, Andrea
    Majumdar, Satya N.
    Schehr, Gregory
    PHYSICAL REVIEW E, 2022, 106 (04)