Integrative Single-Cell RNA-Seq, Single Cell ATAC-Seq, and Spatial RNA-Seq Analysis of Heterogeneity in HPV-Related Head and Neck Squamous Cell Carcinoma

被引：0
|
作者：
Dalai, P. [1 ]
Gensterblum-Miller, E. [1 ]
Gu, W. [1 ]
Bhangale, A. [2 ]
Brummel, C. [1 ]
Mills, R. [1 ]
Brenner, C. [1 ]
机构：
[1] Univ Michigan, Ann Arbor, MI USA
[2] Univ Michigan, Dept Otolaryngol Head & Neck Surg, Ann Arbor, MI USA
来源：
INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS | 2024年 / 118卷 / 05期
关键词：
D O I：
暂无
中图分类号：
R73 [肿瘤学];
学科分类号：
100214 ;
摘要：
228
引用
收藏
页码：E73 / E74
页数：2
相关论文
共 50 条
  • [21] Evaluation of Ranzoni et al.: Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Human Developmental Hematopoiesis
    McKinney-Freeman, Shannon
    Hall, Trent
    CELL STEM CELL, 2021, 28 (03) : 357 - 358
  • [22] Benchmarking algorithms for joint integration of unpaired and paired single-cell RNA-seq and ATAC-seq data
    Lee M.Y.Y.
    Kaestner K.H.
    Li M.
    Genome Biology, 24 (1)
  • [23] Integrated analysis of single-cell RNA-seq and bulk RNA-seq unravels the molecular feature of tumor-associated neutrophils of head and neck squamous cell carcinoma
    Haiyang Cui
    Zhikai Li
    Yukun Liu
    Yuchuan Yang
    Linkuan Huangfu
    Jinglin Kong
    Xiaocong Sun
    Shibo Gao
    Daoke Yang
    Yingjuan Zheng
    BMC Cancer, 25 (1)
  • [24] Integrated analysis of single-cell RNA-seq and bulk RNA-seq unravels the molecular feature of M2 macrophages of head and neck squamous cell carcinoma
    Wu, Siyuan
    Lv, Xiaozhi
    Wei, Haigang
    Wu, Jialin
    Liu, Shiwei
    Li, Xia
    Song, Jing
    Zou, Chen
    Ai, Yilong
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2024, 28 (05)
  • [25] Comprehensive analysis of single-cell RNA-seq and bulk RNA-seq revealed the heterogeneity and convergence of the immune microenvironment in renal cell carcinoma
    Shihui Lv
    Liping Tao
    Hongbing Liao
    Zhiming Huang
    Yongyong Lu
    Functional & Integrative Genomics, 2023, 23
  • [26] Comprehensive analysis of single-cell RNA-seq and bulk RNA-seq revealed the heterogeneity and convergence of the immune microenvironment in renal cell carcinoma
    Lv, Shihui
    Tao, Liping
    Liao, Hongbing
    Huang, Zhiming
    Lu, Yongyong
    FUNCTIONAL & INTEGRATIVE GENOMICS, 2023, 23 (02)
  • [27] A Cell Cycle-Aware Network for Data Integration and Label Transferring of Single-Cell RNA-Seq and ATAC-Seq
    Liu, Jiajia
    Ma, Jian
    Wen, Jianguo
    Zhou, Xiaobo
    ADVANCED SCIENCE, 2024,
  • [28] Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads
    De Rop, Florian, V
    Ismail, Joy N.
    Bravo Gonzalez-Blas, Carmen
    Hulselmans, Gert J.
    Flerin, Christopher Campbell
    Janssens, Jasper
    Theunis, Koen
    Christiaens, Valerie M.
    Wouters, Jasper
    Marcassa, Gabriele
    de Wit, Joris
    Poovathingal, Suresh
    Aerts, Stein
    ELIFE, 2022, 11
  • [29] A deep generative model for multi-view profiling of single-cell RNA-seq and ATAC-seq data
    Li, Gaoyang
    Fu, Shaliu
    Wang, Shuguang
    Zhu, Chenyu
    Duan, Bin
    Tang, Chen
    Chen, Xiaohan
    Chuai, Guohui
    Wang, Ping
    Liu, Qi
    GENOME BIOLOGY, 2022, 23 (01)
  • [30] A deep generative model for multi-view profiling of single-cell RNA-seq and ATAC-seq data
    Gaoyang Li
    Shaliu Fu
    Shuguang Wang
    Chenyu Zhu
    Bin Duan
    Chen Tang
    Xiaohan Chen
    Guohui Chuai
    Ping Wang
    Qi Liu
    Genome Biology, 23
12345