CMRxRecon: A publicly available k-space dataset and benchmark to advance deep learning for cardiac MRI

被引:0
|
作者
Wang, Chengyan [1 ]
Lyu, Jun [2 ]
Wang, Shuo [3 ]
Qin, Chen [4 ]
Guo, Kunyuan [5 ]
Zhang, Xinyu [1 ]
Yu, Xiaotong [5 ]
Li, Yan [6 ]
Wang, Fanwen [7 ]
Jin, Jianhua [8 ]
Shi, Zhang [9 ]
Xu, Ziqiang [10 ]
Tian, Yapeng [11 ]
Hua, Sha [12 ]
Chen, Zhensen [13 ]
Liu, Meng [1 ]
Sun, Mengting [1 ]
Kuang, Xutong [1 ]
Wang, Kang [3 ]
Wang, Haoran [3 ]
Li, Hao [13 ]
Chu, Yinghua [14 ]
Yang, Guang [7 ]
Bai, Wenjia [15 ,16 ]
Zhuang, Xiahai [8 ]
Wang, He [1 ,13 ]
Qin, Jing [17 ]
Qu, Xiaobo [5 ]
机构
[1] Fudan Univ, Human Phenome Inst, Shanghai, Peoples R China
[2] Harvard Med Sch, Brigham & Womens Hosp, Dept Psychiat, Boston, MA USA
[3] Fudan Univ, Digital Med Res Ctr, Sch Basic Med Sci, Shanghai, Peoples R China
[4] Imperial Coll London, Dept Elect & Elect Engn & I X, London, England
[5] Xiamen Univ, Natl Inst Data Sci Hlth & Med, Dept Elect Sci, Fujian Prov Key Lab Plasma & Magnet Resonance, Xiamen, Peoples R China
[6] Shanghai Jiao Tong Univ, Sch Med, Ruijin Hosp, Dept Radiol, Shanghai, Peoples R China
[7] Imperial Coll London, Dept Bioengn & Imperial X, London, England
[8] Fudan Univ, Sch Data Sci, Shanghai, Peoples R China
[9] Fudan Univ, Zhongshan Hosp, Dept Radiol, Shanghai, Peoples R China
[10] Univ Shanghai Sci & Technol, Sch Hlth Sci & Engn, Shanghai, Peoples R China
[11] Univ Texas Dallas, Dept Comp Sci, Richardson, TX USA
[12] Shanghai Jiao Tong Univ, RuiJin Hosp Lu Wan Branch, Dept Urol, Sch Med, Shanghai, Peoples R China
[13] Fudan Univ, Inst Sci & Technol Brain Inspired Intelligence, Shanghai 200433, Peoples R China
[14] Simens Healthineers Ltd, Beijing, Peoples R China
[15] Imperial Coll London, Dept Brain Sci, London, England
[16] Imperial Coll London, Dept Comp, London, England
[17] Hong Kong Polytech Univ, Sch Nursing, Hong Kong, Peoples R China
基金
中国国家自然科学基金;
关键词
D O I
10.1038/s41597-024-03525-4
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cardiac magnetic resonance imaging (CMR) has emerged as a valuable diagnostic tool for cardiac diseases. However, a significant drawback of CMR is its slow imaging speed, resulting in low patient throughput and compromised clinical diagnostic quality. The limited temporal resolution also causes patient discomfort and introduces artifacts in the images, further diminishing their overall quality and diagnostic value. There has been growing interest in deep learning-based CMR imaging algorithms that can reconstruct high-quality images from highly under-sampled k-space data. However, the development of deep learning methods requires large training datasets, which have so far not been made publicly available for CMR. To address this gap, we released a dataset that includes multi-contrast, multi-view, multi-slice and multi-coil CMR imaging data from 300 subjects. Imaging studies include cardiac cine and mapping sequences. The 'CMRxRecon' dataset contains raw k-space data and auto-calibration lines. Our aim is to facilitate the advancement of state-of-the-art CMR image reconstruction by introducing standardized evaluation criteria and making the dataset freely accessible to the research community.
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页数:9
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