LOW-RESOLUTION REAL-SPACE ENVELOPES - AN APPROACH TO THE ABINITIO MACROMOLECULAR PHASE PROBLEM

被引:36
|
作者
SUBBIAH, S
机构
[1] Beckman Laboratories for Structural Biology, Department of Cell Biology, Stanford University School of Medicine, Stanford
关键词
D O I
10.1126/science.2011749
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
An ab initio approach to the phase problem in macromolecular x-ray crystallography is described. A random gas of hard-sphere point scatterers is allowed to condense under the constraint of the solvent fraction and the restraint of the observed Fourier amplitude data. Two applications to real macromolecular examples are discussed. This method produces an approximate outline of the bulk solvent regions and thus yields a low-resolution picture of the unit cell that can be extended to higher resolutions in special cases, such as through the use of molecular replacement or of noncrystallographic symmetry-based phase extension.
引用
下载
收藏
页码:128 / 133
页数:6
相关论文
共 50 条
  • [41] The use of wavelet transforms in low-resolution phase extension
    Wilson, J
    Main, P
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2000, 56 : 625 - 633
  • [42] Low-resolution phase extension using wavelet analysis
    Main, P
    Wilson, J
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2000, 56 : 1324 - 1331
  • [43] Real-space renormalization group approach to driven diffusive systems
    Hanney, T.
    Stinchcombe, R. B.
    JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL, 2006, 39 (47): : 14535 - 14544
  • [44] The use of wavelet transforms in low-resolution phase extension
    Wilson, J
    Main, P
    METHODS IN MACROMOLECULAR CRYSTALLOGRAPHY, 2001, 325 : 82 - 94
  • [45] Observing multifarious topological phase transitions with real-space indicator
    Lu, Yong-Heng
    Wang, Yao
    Mei, Feng
    Chang, Yi-Jun
    Zheng, Hang
    Jia, Suotang
    Jin, Xian-Min
    NANOPHOTONICS, 2022, 11 (01) : 153 - 160
  • [46] Real-space visualization of the phase transition of the In/Si(111) system
    Lee, Geunseop
    SURFACE AND INTERFACE ANALYSIS, 2006, 38 (12-13) : 1636 - 1640
  • [47] Real-space visualization of quantum phase transitions by network topology
    Zaman, Shehtab
    Lee, Wei-Cheng
    PHYSICAL REVIEW E, 2019, 100 (01)
  • [48] Real-space condensation in a dilute Bose gas at low temperature
    Kulik, IO
    LOW TEMPERATURE PHYSICS, 2001, 27 (9-10) : 873 - 875
  • [49] Neural approach for the magnification of low-resolution document images
    Kezzoula, Zakia
    Faouci, Soumia
    Gaceb, Djamel
    2018 IEEE/ACS 15TH INTERNATIONAL CONFERENCE ON COMPUTER SYSTEMS AND APPLICATIONS (AICCSA), 2018,
  • [50] A New Variational Approach to Deblurring Low-Resolution Images
    Shao, Wen-Ze
    Ge, Qi
    Wang, Li-Qian
    Lin, Yun-Zhi
    Deng, Hai-Song
    TENTH INTERNATIONAL CONFERENCE ON GRAPHICS AND IMAGE PROCESSING (ICGIP 2018), 2019, 11069