DISCOVERING PAIRWISE COMPATIBILITY GRAPHS

被引:21
|
作者
Yanhaona, Muhammad Nur [1 ]
Bayzid, Md. Shamsuzzoha [1 ]
Rahman, Md. Saidur [1 ]
机构
[1] Bangladesh Univ Engn & Technol, Dept Comp Sci & Engn, Dhaka 1000, Bangladesh
关键词
Pairwise compatibility graphs; phylogenetic tree; tree power; tree root;
D O I
10.1142/S1793830910000917
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
Let T be an edge weighted tree, let d(T) (u, v) be the sum of the weights of the edges on the path from u to v in T, and let d(min) and dmax be two non-negative real numbers such that d(min) <= d(max). Then a pairwise compatibility graph of T for dmin and dmax is a graph G = (V, E), where each vertex u' is an element of V corresponds to a leaf u of T and there is an edge (u', v') is an element of E if and only if d(min) <= d(T) (u, v) <= d(max). A graph G is called a pairwise compatibility graph (PCG) if there exists an edge weighted tree T and two non-negative real numbers dmin and d(max) such that G is a pairwise compatibility graph of T for d(min) and d(max). Kearney et al. conjectured that every graph is a PCG [3]. In this paper, we refute the conjecture by showing that not all graphs are PCGs. Moreover, we recognize several classes of graphs as pairwise compatibility graphs. We identify two restricted classes of bipartite graphs as PCG. We also show that the well known tree power graphs and some of their extensions are PCGs.
引用
收藏
页码:607 / 623
页数:17
相关论文
共 50 条
  • [21] A necessary condition and a sufficient condition for pairwise compatibility graphs
    Hossain M.I.
    Salma S.A.
    Rahman M.S.
    Mondal D.
    1600, Brown University (21): : 341 - 352
  • [22] A method for enumerating pairwise compatibility graphs with a given number of vertices
    Azam, Naveed Ahmed
    Shurbevski, Aleksandar
    Nagamochi, Hiroshi
    DISCRETE APPLIED MATHEMATICS, 2021, 303 (303) : 171 - 185
  • [23] On 2-Interval Pairwise Compatibility Properties of Two Classes of Grid Graphs
    Papan, Bishal Basak
    Pranto, Protik Bose
    Rahman, Md Saidur
    COMPUTER JOURNAL, 2023, 66 (05): : 1256 - 1267
  • [24] On pairwise compatibility graphs having Dilworth number two (vol 524, pg 34, 2014)
    Calamoneri, T.
    Petreschi, R.
    THEORETICAL COMPUTER SCIENCE, 2015, 602 : 158 - 159
  • [25] Discovering bands from graphs
    Tatti, Nikolaj
    DATA MINING AND KNOWLEDGE DISCOVERY, 2014, 28 (5-6) : 1429 - 1454
  • [26] Discovering bands from graphs
    Nikolaj Tatti
    Data Mining and Knowledge Discovery, 2014, 28 : 1429 - 1454
  • [27] Transactional database analysis by discovering pairwise interactions strengths
    Valle, Mauricio A.
    Ruz, Gonzalo A.
    Rica, Sergio
    2018 IEEE/ACM INTERNATIONAL CONFERENCE ON ADVANCES IN SOCIAL NETWORKS ANALYSIS AND MINING (ASONAM), 2018, : 849 - 854
  • [28] Pairwise disjoint paths in pancake graphs
    Sawada, Naoki
    Kaneko, Keiichi
    Peng, Shietung
    EIGHTH INTERNATIONAL CONFERENCE ON PARALLEL AND DISTRIBUTED COMPUTING, APPLICATIONS AND TECHNOLOGIES, PROCEEDINGS, 2007, : 376 - +
  • [29] Pairwise Markov properties for regression graphs
    Sadeghi, Kayvan
    Wermuth, Nanny
    STAT, 2016, 5 (01): : 286 - 294
  • [30] Estimating Pairwise Distances in Large Graphs
    Christoforaki, Maria
    Suel, Torsten
    2014 IEEE INTERNATIONAL CONFERENCE ON BIG DATA (BIG DATA), 2014, : 335 - 344