DNA barcoding of Pentatomomorpha bugs (Hemiptera: Heteroptera) from Western Ghats of India
被引:22
|
作者:
Tembe, Sanket
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机构:
Modern Coll Arts Sci & Commerce, Dept Zool, Pune 411005, Maharashtra, India
Univ Pune Campus, Natl Ctr Cell Sci, Mol Biol Unit, Pune 411007, Maharashtra, IndiaModern Coll Arts Sci & Commerce, Dept Zool, Pune 411005, Maharashtra, India
Tembe, Sanket
[1
,2
]
Shouche, Yogesh
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机构:
Univ Pune Campus, Natl Ctr Cell Sci, Mol Biol Unit, Pune 411007, Maharashtra, IndiaModern Coll Arts Sci & Commerce, Dept Zool, Pune 411005, Maharashtra, India
Shouche, Yogesh
[2
]
Ghate, H. V.
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机构:
Modern Coll Arts Sci & Commerce, Dept Zool, Pune 411005, Maharashtra, IndiaModern Coll Arts Sci & Commerce, Dept Zool, Pune 411005, Maharashtra, India
Ghate, H. V.
[1
]
机构:
[1] Modern Coll Arts Sci & Commerce, Dept Zool, Pune 411005, Maharashtra, India
[2] Univ Pune Campus, Natl Ctr Cell Sci, Mol Biol Unit, Pune 411007, Maharashtra, India
DNA barcoding;
mtCOI;
Heteroptera;
Pentatomomorpha;
Western Ghats;
India;
D O I:
10.1016/j.mgene.2014.09.006
中图分类号:
Q3 [遗传学];
学科分类号:
071007 ;
090102 ;
摘要:
Recent studies from East Asia and Canadian National Collection of Insects have established the utility of DNA barcoding technique in identification of true bugs. The present study is an expansion of the database by adding mitochondrial cytochrome c oxidase I (mtCOI) sequences from forty three species of indigenous true bugs of India. mtCOI gene analysis of infraorder Pentatomomorpha covering a total of seventy three species that belong to five superfamilies; Pentatomoidea, Coreoidea, Pyrrhocoroidea, Lygaeoidea and Aradoidea revealed more than 3% interspecific distances in all the taxa studied except for two cases which showed barcode sharing. Less than 2% intra-specific divergencewas observed in 97% of the taxa analysed and the average interspecies genetic distance was about 29 times higher than the average intraspecies genetic divergence. Distinct sequence divergence pattern at generic level and NJ clustering analysis suggests that COI barcode is an excellent molecular marker for species level identification of unknown taxa; however it may not be useful for resolving deep levels of divergence. Species identification even at nymphal stage could be achieved confirming the efficacy of this technique. (C) 2014 The Authors. Published by Elsevier B. V.
机构:
China Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
China Agr Univ, Coll Plant Protect, MOA Key Lab Pest Monitoring & Green Management, Beijing 100193, Peoples R ChinaChina Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
Liu, Yingqi
Li, Hu
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机构:
China Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
China Agr Univ, Coll Plant Protect, MOA Key Lab Pest Monitoring & Green Management, Beijing 100193, Peoples R ChinaChina Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
Li, Hu
Song, Fan
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机构:
China Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
China Agr Univ, Coll Plant Protect, MOA Key Lab Pest Monitoring & Green Management, Beijing 100193, Peoples R ChinaChina Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
Song, Fan
Zhao, Yisheng
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机构:
China Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
China Agr Univ, Coll Plant Protect, MOA Key Lab Pest Monitoring & Green Management, Beijing 100193, Peoples R ChinaChina Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
Zhao, Yisheng
Wilson, John-James
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机构:
Natl Museums Liverpool, Vertebrate Zool World Museum, Liverpool, Merseyside, England
Naresuan Univ, Fac Med Sci, Dept Microbiol & Parasitol, Phitsanulok, ThailandChina Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
Wilson, John-James
Cai, Wanzhi
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机构:
China Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
China Agr Univ, Coll Plant Protect, MOA Key Lab Pest Monitoring & Green Management, Beijing 100193, Peoples R ChinaChina Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China
机构:
Univ Nacl Sur, Dept Biol Bioquim & Farm, RA-8000 Bahia Blanca, Buenos Aires, ArgentinaUniv Nacl Sur, Dept Biol Bioquim & Farm, RA-8000 Bahia Blanca, Buenos Aires, Argentina
Marco, Magnanelli
Del Carmen Coscaron, Maria
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机构:
Museo La Plata, Div Entomol, La Plata, Buenos Aires, ArgentinaUniv Nacl Sur, Dept Biol Bioquim & Farm, RA-8000 Bahia Blanca, Buenos Aires, Argentina
机构:
Fundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, BrazilFundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, Brazil
Dos Santos Rodrigues, Juliana Mourao
Nery, Leticia
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Fundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, BrazilFundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, Brazil
Nery, Leticia
Rodrigues, Higor D. D.
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机构:
Fundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, Brazil
Univ Fed Alagoas, Museu Hist Nat, Maceio, Alagoas, BrazilFundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, Brazil
Rodrigues, Higor D. D.
Figueiredo Moreira, Felipe Ferraz
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Fundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, BrazilFundacao Oswaldo Cruz, Inst Oswaldo Cruz, Lab Biodiversidade Entomol, Rio De Janeiro, Brazil