LUMINESCENCE STUDIES OF THE INTERCALATION OF CU(TMPYP4) INTO DNA

被引:109
|
作者
HUDSON, BP [1 ]
SOU, J [1 ]
BERGER, DJ [1 ]
MCMILLIN, DR [1 ]
机构
[1] PURDUE UNIV, DEPT CHEM, W LAFAYETTE, IN 47907 USA
关键词
D O I
10.1021/ja00049a034
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Different types of DNA have been used to investigate binding interactions of Cu(TMpyP4), where TMpyP4 denotes the deprotonated form of meso-tetrakis(4-(N-methylpyridiniumyl))porphyrin. Physical methods employed include electronic absorption and circular dichroism as well as luminescence spectroscopy. Most of the studies have been carried out at mu = 0.2 M in a pH 7.8 Tris buffer at 25-degrees-C. With DNA samples containing both guanine-cytosine and adenine-thymine base pairs, our results confirm that Cu(TMpyP4) can bind at external sites-most likely within one of the grooves of DNA-or by intercalation (Pasternack, R. F.; Gibbs, E. J.; Villafranca, J. J. Biochemistry 1983, 22, 2406-2414). Moreover, our results show that the distribution between the two types of sites depends on the nucleotide-to-copper ratio and that intercalation is favored at moderate ratios. A guanine-cytosine base pair in combination with any other base pair seems sufficient to define an intercalation site. Novel emission with a lifetime of about 20 ns is observed from the tripdoublet and tripquartet excited states of intercalated Cu(TMpyP4). This emission is normally quenched by a mechanism which involves coordination of the solvent at an axial position of the copper center. Deactivation is proposed to occur via a low-energy d-d state of the five-coordinate complex. Solvent-induced quenching occurs when the complex is externally bound but not when the complex is intercalated because the axial coordination sites are blocked. The results are of interest because porphyrins are important DNA-binding agents and because solvent-induced quenching is becoming recognized as an important type of exciplex phenomenon that can occur in coordinatively unsaturated complexes.
引用
收藏
页码:8997 / 9002
页数:6
相关论文
共 50 条
  • [1] Model of cooperative interaction of TMPyP4 porphyrine with DNA quadruplex
    A. G. Kudrev
    [J]. Russian Journal of General Chemistry, 2016, 86 : 1353 - 1363
  • [2] Model of cooperative interaction of TMPyP4 porphyrine with DNA quadruplex
    Kudrev, A. G.
    [J]. RUSSIAN JOURNAL OF GENERAL CHEMISTRY, 2016, 86 (06) : 1353 - 1363
  • [3] Scheme of the Complex Formation of DNA Telomeric Sequence with TMPyP4 Porphyrine
    A. G. Kudrev
    [J]. Russian Journal of General Chemistry, 2018, 88 : 2578 - 2588
  • [4] Scheme of the Complex Formation of DNA Telomeric Sequence with TMPyP4 Porphyrine
    Kudrev, A. G.
    [J]. RUSSIAN JOURNAL OF GENERAL CHEMISTRY, 2018, 88 (12) : 2578 - 2588
  • [5] Case for G-quadruplex intercalation: Bcl-2 promoter sequence interactions with the cationic porphyrins, TMPyP2, TMPyP3, and TMPyP4
    Le, Vu H.
    Lewis, Edwin A.
    Nagesh, Narayana
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2013, 246
  • [6] Interactions of TMPyP4 and TMPyP2 with quadruplex DNA. Structural basis for the differential effects on telomerase inhibition
    Han, FXG
    Wheelhouse, RT
    Hurley, LH
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1999, 121 (15) : 3561 - 3570
  • [7] Lowering the overall charge on TMPyP4 improves its selectivity for G-quadruplex DNA
    Ruan, Thomas L.
    Davis, Supriya J.
    Powell, Barrett M.
    Harbeck, Cole P.
    Habdas, Jan
    Habdas, Piotr
    Yatsunyk, Liliya A.
    [J]. BIOCHIMIE, 2017, 132 : 121 - 130
  • [8] Mass spectrometric studies on effects of counter ions of TMPyP4 on binding to human telomeric DNA and RNA G-quadruplexes
    Bai, Li-Ping
    Liu, Jie
    Han, Li
    Ho, Hing-Man
    Wang, Renxiao
    Jiang, Zhi-Hong
    [J]. ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2014, 406 (22) : 5455 - 5463
  • [9] Mass spectrometric studies on effects of counter ions of TMPyP4 on binding to human telomeric DNA and RNA G-quadruplexes
    Li-Ping Bai
    Jie Liu
    Li Han
    Hing-Man Ho
    Renxiao Wang
    Zhi-Hong Jiang
    [J]. Analytical and Bioanalytical Chemistry, 2014, 406 : 5455 - 5463
  • [10] Design of a new hairpin DNAzyme: The activity controlled by TMPyP4
    Wu Lei
    Tong Qian
    Li Hai-chao
    Xu Hao-ran
    Lu Ming
    Zhang Yue-bin
    Sun Yu
    Li Wen-zhao
    Li Zhengqiang
    [J]. AFRICAN JOURNAL OF BIOTECHNOLOGY, 2011, 10 (40): : 7902 - 7910