Design of a new hairpin DNAzyme: The activity controlled by TMPyP4

被引:0
|
作者
Wu Lei [1 ]
Tong Qian [2 ]
Li Hai-chao [3 ]
Xu Hao-ran [1 ]
Lu Ming [1 ]
Zhang Yue-bin [1 ]
Sun Yu [4 ]
Li Wen-zhao [1 ]
Li Zhengqiang [1 ]
机构
[1] Jilin Univ, Minist Educ, Key Lab Mol Enzymol & Engn, Changchun 130023, Peoples R China
[2] Jilin Univ, Hosp 1, Dept Cardiol, Changchun 130023, Peoples R China
[3] Jilin Univ, Coll Life Sci, Changchun 130023, Peoples R China
[4] Chang Chun Illness Defend Control Ctr, Changchun, Peoples R China
来源
AFRICAN JOURNAL OF BIOTECHNOLOGY | 2011年 / 10卷 / 40期
基金
中国国家自然科学基金;
关键词
10-23; DNAzyme; hairpin DNAzyme; G-quadruplex structure; TMPyP4; G-QUADRUPLEX; K+ SOLUTION; PORPHYRIN; RNA; TELOMERE; BINDING; LIGAND;
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A new 10-23 hairpin DNAzyme with a G-quadruplex structure stem was designed. The formation and stability of the G-quadruplex structure as the DNAzyme stem in the absence or the presence of TMPyP4 were investigated by UV-visible spectroscopy, circular dichroism (CD) and differential scanning calorimetry (DSC) methods, respectively. The results showed that the stability of this DNAzyme can be enhanced greatly due to the interaction between TMPyP4 and the DNAzyme. The relationship between structural stability and activity of the DNAzyme was studied by in vitro catalytic reaction. The activity of this DNAzyme was regulated by the stability of DNAzyme when TMPyP4 was intercalated into G-quadruplex structure stem. The catalytic activity of the 10-23 hairpin DNAzyme decreased and even inactivated due to the enhanced stability of G-quadruplex structure by TMPyP4 molecules. This DNAzyme is controllable to cleavage substrate and has some potential significance in gene therapy.
引用
收藏
页码:7902 / 7910
页数:9
相关论文
共 50 条
  • [1] LUMINESCENCE STUDIES OF THE INTERCALATION OF CU(TMPYP4) INTO DNA
    HUDSON, BP
    SOU, J
    BERGER, DJ
    MCMILLIN, DR
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (23) : 8997 - 9002
  • [2] Antitumor activity of TMPyP4 interacting G-quadruplex in retinoblastoma cell lines
    Mikami-Terao, Yoko
    Akiyama, Masaharu
    Yuza, Yuki
    Yanagisawa, Takaaki
    Yamada, Osamu
    Kawano, Takeshi
    Agawa, Miyuki
    Ida, Hiroyuki
    Yamada, Hisashi
    [J]. EXPERIMENTAL EYE RESEARCH, 2009, 89 (02) : 200 - 208
  • [3] TMPYP4, AN EFFECTIVE AND SAFETY CHOICE ON TREATING ESOPHAGEAL CANCER
    Zhang, Yuanying
    Zhou, Enhui
    Liu, Bing-Rong
    Yang, Huiyu
    [J]. GASTROENTEROLOGY, 2022, 162 (07) : S1080 - S1080
  • [4] Model of cooperative interaction of TMPyP4 porphyrine with DNA quadruplex
    A. G. Kudrev
    [J]. Russian Journal of General Chemistry, 2016, 86 : 1353 - 1363
  • [5] Model of cooperative interaction of TMPyP4 porphyrine with DNA quadruplex
    Kudrev, A. G.
    [J]. RUSSIAN JOURNAL OF GENERAL CHEMISTRY, 2016, 86 (06) : 1353 - 1363
  • [6] Antitumor Effects of Telomerase Inhibitor TMPyP4 in Osteosarcoma Cell Lines
    Fujimori, Jun
    Matsuo, Toshihiro
    Shimose, Shoji
    Kubo, Tadahiko
    Ishikawa, Masakazu
    Yasunaga, Yuji
    Ochi, Mitsuo
    [J]. JOURNAL OF ORTHOPAEDIC RESEARCH, 2011, 29 (11) : 1707 - 1711
  • [7] Shedding Light on the Interaction between TMPyP4 and Human Telomeric Quadruplexes
    Martino, Luigi
    Pagano, Bruno
    Fotticchia, Iolanda
    Neidle, Stephen
    Giancola, Concetta
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2009, 113 (44): : 14779 - 14786
  • [8] Scheme of the Complex Formation of DNA Telomeric Sequence with TMPyP4 Porphyrine
    A. G. Kudrev
    [J]. Russian Journal of General Chemistry, 2018, 88 : 2578 - 2588
  • [9] Scheme of the Complex Formation of DNA Telomeric Sequence with TMPyP4 Porphyrine
    Kudrev, A. G.
    [J]. RUSSIAN JOURNAL OF GENERAL CHEMISTRY, 2018, 88 (12) : 2578 - 2588
  • [10] Structural and spectral transformation of cationic porphyrin TMPyP4 at adsorption on graphene
    Karachevtsev, V. A.
    Stepanian, S. G.
    Karachevtsev, M. V.
    Valeev, V. A.
    Adamowicz, L.
    [J]. JOURNAL OF MOLECULAR STRUCTURE, 2021, 1245