Characterization of the complete chloroplast genome of Eulophia zollingeri, an endangered orchid in China

被引：0
|
作者：
Xiaowei Huo
Yanyan Zhao
Zengqiang Qian
Mengmeng Liu
机构：
[1] Hebei University,Key Laboratory of Pharmaceutical Quality Control of Hebei Province, College of Pharmaceutical Science
[2] Hebei University,School of Traditional Chinese Medicine
[3] Jiangsu University of Technology,School of Electrical and Information Engineering, Institute of Bioinformatics and Medical Engineering
[4] Shaanxi Normal University,College of Life Sciences
来源：
Conservation Genetics Resources | 2018年 / 10卷
关键词：
Chloroplast genome; Phylogenetic analysis;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
Eulophia zollingeri (Orchidaceae) is a vulnerable plant in China. In this study, the complete chloroplast genome of E. zollingeri is assembled based on high-throughput sequencing data for the first time. The complete chloroplast of E. zollingeri is 145,201 bp in length, containing a large single copy (LSC) of 81,566 bp, a small single copy of 13,091 bp and a pair of inverted repeats of 25,272 bp. The overall GC content of the genome is 37.1%. The cp genome contains 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic analysis based on chloroplast genomes indicates that E. zollingeri is closely related to the orchid within the Epidendroideae subfamily.
引用
收藏
页码：817 / 819
页数：2
相关论文
共 50 条
  • [31] The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China
    Sima, Yongkang
    Li, Yunqing
    Yuan, Xiaolong
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 1038 - 1039
  • [32] The complete chloroplast genome of Calycanthus chinensis, an endangered species endemic to China
    Chen, Xiaodan
    Yang, Jia
    Zhang, Hao
    Bai, Ru
    Zhang, Xiao
    Bai, Guoqing
    Dai, Panfeng
    Zhao, Guifang
    CONSERVATION GENETICS RESOURCES, 2019, 11 (01) : 55 - 58
  • [33] The complete chloroplast genome of Magnolia omeiensis, an endangered and endemic species in China
    Ling, Li-Zhen
    Zhang, Shu-Dong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1909 - 1910
  • [34] The complete chloroplast genome sequence of Begonia ferox, an endangered species in China
    Zhou, Yangming
    Yang, Xuan
    Liang, Qiongyue
    Deng, Tao
    Hu, Xinghua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (07): : 746 - 750
  • [35] The complete chloroplast genome of Sauvagesia rhodoleuca, an endangered species endemic to China
    Xie, Xiao
    Huang, Jiashuang
    Zhang, Yonghua
    Zhu, Shanshan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (08): : 2398 - 2399
  • [36] The complete chloroplast genome of Lilium taliense, an endangered species endemic to China
    Qian Zhang
    Yu Bi
    Mingfang Zhang
    Xuqing Chen
    Fengping Yang
    Jing Xue
    Yunpeng Du
    Xiuhai Zhang
    Conservation Genetics Resources, 2017, 9 : 201 - 203
  • [37] Complete chloroplast genome of Isoetes hypsophila (Isoetaceae), the Endangered quillwort in China
    Gu, Yufeng
    Yu, Junhao
    Shang, Hui
    Liu, Baodong
    Yan, Yuehong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2908 - 2909
  • [38] The complete chloroplast genome of Lilium taliense, an endangered species endemic to China
    Zhang, Qian
    Bi, Yu
    Zhang, Mingfang
    Chen, Xuqing
    Yang, Fengping
    Xue, Jing
    Du, Yunpeng
    Zhang, Xiuhai
    CONSERVATION GENETICS RESOURCES, 2017, 9 (02) : 201 - 203
  • [39] The complete chloroplast genome sequence of Pellacalyx yunnanensis: an endangered species in China
    Zhang, Jinfeng
    Li, Yunqing
    Yuan, Xiaolong
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3948 - 3949
  • [40] The complete chloroplast genome of Malania oleifera (Olacaceae), an endangered species in China
    Yang, Yang
    He, Shui-Lian
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 1867 - 1868
12345