Global shortening of 3′UTRs by alternative polyadenylation (APA) has been observed in cancer cells. However, the role of APA in cancer remains unknown. CCND1 is a proto-oncogene that regulates progression through the G1-S phase of the cell cycle; moreover, it has been observed to be switching to proximal APA sites in cancer cells. To investigate the biological function of the APA of CCND1, we edited the weak poly(A) signal (PAS) of the proximal APA site to a canonical PAS using the CRISPR/Cas9 method, which can force the cells to use a proximal APA site. Cell cycle profiling and proliferation assays revealed that the proximal APA sites of CCND1 accelerated the cell cycle and promoted cell proliferation, but UTR-APA and CR-APA act via different molecular mechanisms. These results indicate that PAS editing with CRISPR/Cas9 provides a good method by which to study the biological function of APA.
机构:
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, David Geffen Sch Med, Dept Biol Chem, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Mitra, Mithun
Johnson, Elizabeth L.
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Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Johnson, Elizabeth L.
Swamy, Vinay S.
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Univ Calif Los Angeles, Dept Biochem, Los Angeles, CA USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Swamy, Vinay S.
Nersesian, Lois E.
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Univ Calif Los Angeles, Dept Chem Engn, Los Angeles, CA 90024 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Nersesian, Lois E.
Corney, David C.
论文数: 0引用数: 0
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Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Princeton Univ, Dept Mol Biol, Princeton, NJ 08544 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Corney, David C.
Robinson, David G.
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Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Robinson, David G.
Taylor, Daniel G.
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Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Taylor, Daniel G.
Ambrus, Aaron M.
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机构:
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Ambrus, Aaron M.
Jelinek, David
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Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Jelinek, David
Wang, Wei
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Princeton Univ, Lewis Sigler Inst Integrat Genom, Princeton, NJ 08544 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Wang, Wei
Batista, Sandra L.
论文数: 0引用数: 0
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机构:
Univ Southern Calif, Dept Comp Sci, Los Angeles, CA USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Batista, Sandra L.
Coller, Hilary A.
论文数: 0引用数: 0
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机构:
Univ Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, David Geffen Sch Med, Dept Biol Chem, Los Angeles, CA 90095 USAUniv Calif Los Angeles, Dept Mol Cell & Dev Biol, Los Angeles, CA 90095 USA
机构:
Second Mil Med Univ, Eastern Hepatobiliary Surg Hosp, Dept Mol Oncol, Shanghai 200438, Peoples R China
Second Mil Med Univ, Natl Ctr Liver Canc, Shanghai 200438, Peoples R ChinaShanghai Jiao Tong Univ, Shanghai Chest Hosp, Esophageal Dis Ctr, Dept Thorac Surg, Shanghai 200030, Peoples R China
Ji, Weidan
Zhang, Qian
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机构:
Second Mil Med Univ, Eastern Hepatobiliary Surg Hosp, Dept Mol Oncol, Shanghai 200438, Peoples R China
Second Mil Med Univ, Natl Ctr Liver Canc, Shanghai 200438, Peoples R ChinaShanghai Jiao Tong Univ, Shanghai Chest Hosp, Esophageal Dis Ctr, Dept Thorac Surg, Shanghai 200030, Peoples R China
Zhang, Qian
Su, Changqing
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机构:
Second Mil Med Univ, Eastern Hepatobiliary Surg Hosp, Dept Mol Oncol, Shanghai 200438, Peoples R China
Second Mil Med Univ, Natl Ctr Liver Canc, Shanghai 200438, Peoples R ChinaShanghai Jiao Tong Univ, Shanghai Chest Hosp, Esophageal Dis Ctr, Dept Thorac Surg, Shanghai 200030, Peoples R China
机构:
Icahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Kuo, Pei-Yu
Jiang, Zewei
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h-index: 0
机构:
Icahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Jiang, Zewei
Perumal, Deepak
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机构:
Icahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Perumal, Deepak
Leshchenko, Violetta V.
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h-index: 0
机构:
Icahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Leshchenko, Violetta V.
Lagana, Alessandro
论文数: 0引用数: 0
h-index: 0
机构:
Icahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Lagana, Alessandro
Katz, Samuel G.
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机构:
Yale Univ, New Haven, CT USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Katz, Samuel G.
Walensky, Loren D.
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机构:
Dana Farber Canc Inst, Dept Pediat Oncol, Boston, MA 02115 USA
Dana Farber Canc Inst, Linde Program Canc Chem Biol, Boston, MA 02115 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Walensky, Loren D.
Shaknovich, Rita
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机构:
Weill Cornell Med Coll, Div Hematol Oncol, New York, NY USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Shaknovich, Rita
Ye, B. Hilda
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机构:
Albert Einstein Coll Med, Dept Cell Biol, Bronx, NY 10467 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA
Ye, B. Hilda
Parekh, Samir
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机构:
Icahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USAIcahn Sch Med Mt Sinai, Hematol & Med Oncol, New York, NY 10029 USA