The microstructure of the temporo-parieto-occipital subregion and the frontal area of the brain from birth to 20 years of age was studied using computer morphometry. These brain zones are involved in the higher integrative mechanisms of cognitive functioning in children, adolescents and young adults. Structural transformations of the cortex represent a stage-by-stage process. Each stage in the frontal and occipital associative zones has specific temporal limits and is characterized by the quantitative and qualitative specificity of the morphological changes at each of the system levels considered: neuronal, modular, and stratification. The structural modifications from birth to early adulthood are primarily associated with the final development of micro and macroassembles and their structural components, primarily, neurons of various types. The growth and differentiation of neurons involves heterochrony with respect to the terms and developmental rates in the frontal and occipital associative cortex. The terms of the most active synchronous postnatal structural modifications, occurring during the first year of life, during the years 2–3, 6–7, 9–10, and 13–14 were analyzed. It was shown, that local specialization of cellular ensembles at various levels is a consequence of the functional specialization of microensembles, involved in cortical information processing, including cognitive activity and other higher psychophysiological functions of the human brain.