Modelling overdispersion and Markovian features in count data

被引:0
|
作者
Iñaki F. Trocóniz
Elodie L. Plan
Raymond Miller
Mats O. Karlsson
机构
[1] School of Pharmacy,Department of Pharmacy and Pharmaceutical Technology
[2] University of Navarra,Department of Pharmaceutical Biosciences
[3] Uppsala University,undefined
[4] Global Pharmacometrics,undefined
[5] Pfizer Inc,undefined
关键词
Count data; Population pharmacodynamic modelling; NONMEM; Epilepsy; Gabapentin;
D O I
暂无
中图分类号
学科分类号
摘要
The number of counts (events) per unit of time is a discrete response variable that is generally analyzed with the Poisson distribution (PS) model. The PS model makes two assumptions: the mean number of counts (λ) is assumed equal to the variance, and counts occurring in non-overlapping intervals are assumed independent. However, many counting outcomes show greater variability than predicted by the PS model, a phenomenon called overdispersion. The purpose of this study was to implement and explore, in the population context, different distribution models accounting for overdispersion and Markov patterns in the analysis of count data. Daily seizures count data obtained from 551 subjects during the 12-week screening phase of a double-blind, placebo-controlled, parallel-group multicenter study performed in epileptic patients with medically refractory partial seizures, were used in the current investigation. The following distribution models were fitted to the data: PS, Zero-Inflated PS (ZIP), Negative Binomial (NB), and Zero-Inflated Negative Binomial (ZINB) models. Markovian features were introduced estimating different λs and overdispersion parameters depending on whether the previous day was a seizure or a non-seizure day. All analyses were performed with NONMEM VI. All models were successfully implemented and all overdispersed models improved the fit with respect to the PS model. The NB model resulted in the best description of the data. The inclusion of Markovian features in λ and in the overdispersion parameter improved the fit significantly (P < 0.001). The plot of the variance versus mean daily seizure count profiles, and the number of transitions, are suggested as model performance tools reflecting the capability to handle overdispersion and Markovian features, respectively.
引用
收藏
页码:461 / 477
页数:16
相关论文
共 50 条
  • [31] Detecting overdispersion in count data: A zero-inflated Poisson regression analysis
    Jamil, Siti Afiqah Muhamad
    Abdullah, M. Asrul Affendi
    Long, Kek Sie
    Nor, Maria Elena
    Mohamed, Maryati
    Ismail, Norradihah
    [J]. 1ST INTERNATIONAL CONFERENCE ON APPLIED & INDUSTRIAL MATHEMATICS AND STATISTICS 2017 (ICOAIMS 2017), 2017, 890
  • [32] Local influence diagnostics for hierarchical count data models with overdispersion and excess zeros
    Rakhmawati, Trias Wahyuni
    Molenberghs, Geert
    Verbeke, Geert
    Faes, Christel
    [J]. BIOMETRICAL JOURNAL, 2016, 58 (06) : 1390 - 1408
  • [33] overdisp: an R package for direct detection of overdispersion in count data multiple regression analysis
    de Freitas Souza, Rafael
    Fávero, Luiz Paulo
    Belfiore, Patrícia
    Corrêa, Hamilton Luiz
    [J]. International Journal of Business Intelligence and Data Mining, 2022, 20 (03) : 327 - 344
  • [34] Population trends from count data: Handling environmental bias, overdispersion and excess of zeroes
    Tirozzi, Pietro
    Orioli, Valerio
    Dondina, Olivia
    Kataoka, Leila
    Bani, Luciano
    [J]. ECOLOGICAL INFORMATICS, 2022, 69
  • [35] Score tests for zero-inflation and overdispersion in two-level count data
    Lim, Hwa Kyung
    Song, Juwon
    Jung, Byoung Cheol
    [J]. COMPUTATIONAL STATISTICS & DATA ANALYSIS, 2013, 61 : 67 - 82
  • [36] Overdispersion tests in count-data analysis (vol 103, pg 145, 2008)
    Vives, J.
    Losilla, J-M
    Rodrigo, M-F
    Portell, M.
    Llorens, M.
    [J]. PSYCHOLOGICAL REPORTS, 2013, 113 (02) : 683 - 683
  • [37] Modelling correlated count data with covariates
    Shaddick, G.
    Choo, L. L.
    Walker, S. G.
    [J]. JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION, 2007, 77 (11-12) : 945 - 954
  • [38] Statistical modelling for falls count data
    Ullah, Shahid
    Finch, Caroline F.
    Day, Lesley
    [J]. ACCIDENT ANALYSIS AND PREVENTION, 2010, 42 (02): : 384 - 392
  • [39] Modelling count data via copulas
    Safari-Katesari, Hadi
    Samadi, S. Yaser
    Zaroudi, Samira
    [J]. STATISTICS, 2020, 54 (06) : 1329 - 1355
  • [40] Modelling truncated and clustered count data
    Saei, A
    Chambers, R
    [J]. AUSTRALIAN & NEW ZEALAND JOURNAL OF STATISTICS, 2005, 47 (03) : 339 - 349