Finding the region of pseudo-periodic tandem repeats in biological sequences

被引:0
|
作者
Xiaowen Liu
Lusheng Wang
机构
[1] City University of Hong Kong,Department of Computer Science
关键词
Tandem Repeat; Suffix; Similarity Score; Repeated Region; Dynamic Programming Algorithm;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [41] Locating tandem repeats in weighted sequences in proteins
    Zhang, Hui
    Guo, Qing
    Iliopoulos, Costas S.
    BMC BIOINFORMATICS, 2013, 14
  • [42] Detection and visualization of tandem repeats in DNA sequences
    Buchner, M
    Janjarasjitt, S
    IEEE TRANSACTIONS ON SIGNAL PROCESSING, 2003, 51 (09) : 2280 - 2287
  • [43] Extending the network calculus algorithmic toolbox for ultimately pseudo-periodic functions: pseudo-inverse and composition
    Zippo, Raffaele
    Nikolaus, Paul
    Stea, Giovanni
    DISCRETE EVENT DYNAMIC SYSTEMS-THEORY AND APPLICATIONS, 2023, 33 (03): : 181 - 219
  • [44] Extending the network calculus algorithmic toolbox for ultimately pseudo-periodic functions: pseudo-inverse and composition
    Raffaele Zippo
    Paul Nikolaus
    Giovanni Stea
    Discrete Event Dynamic Systems, 2023, 33 : 181 - 219
  • [45] Sensitivity Analysis of Echo State Networks for Forecasting Pseudo-Periodic Time Series
    Basterreeh, Sebastian
    Rubino, Gerardo
    Snasel, Vaclav
    PROCEEDINGS OF THE 2015 SEVENTH INTERNATIONAL CONFERENCE OF SOFT COMPUTING AND PATTERN RECOGNITION (SOCPAR 2015), 2015, : 328 - 333
  • [46] Finding long tandem repeats in long noisy reads
    Morishita, Shinichi
    Ichikawa, Kazuki
    Myers, Eugene W.
    BIOINFORMATICS, 2021, 37 (05) : 612 - 621
  • [47] TRStalker: an efficient heuristic for finding fuzzy tandem repeats
    Pellegrini, Marco
    Renda, M. Elena
    Vecchio, Alessio
    BIOINFORMATICS, 2010, 26 (12) : i358 - i366
  • [48] G-protein activation modulates pseudo-periodic oscillation of Na channel
    Majumdar, Sriparna
    Sikdar, Sujit K.
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2006, 347 (02) : 444 - 451
  • [49] Simplified template parameter estimation for pseudo-periodic signal on-line processing
    Liu, Shaoqiang
    Wang, Lilin
    Wang, Aimin
    Li, Yongzhou
    Pang, Xinmiao
    Dongnan Daxue Xuebao (Ziran Kexue Ban)/Journal of Southeast University (Natural Science Edition), 2009, 39 (05): : 904 - 908
  • [50] Analysis and synthesis of pseudo-periodic job arrivals in Grids: A matching pursuit approach
    Li, Hui
    Heusdens, Richard
    Muskulus, Michael
    Wolters, Lex
    CCGRID 2007: SEVENTH IEEE INTERNATIONAL SYMPOSIUM ON CLUSTER COMPUTING AND THE GRID, 2007, : 189 - +