Unbalanced historical phenotypic data from seed regeneration of a barley ex situ collection

被引:0
|
作者
Maria Y. Gonzalez
Stephan Weise
Yusheng Zhao
Norman Philipp
Daniel Arend
Andreas Börner
Markus Oppermann
Andreas Graner
Jochen C. Reif
Albert W. Schulthess
机构
[1] Leibniz Institute of Plant Genetics and Crop Plant Research (IPK),Department of Breeding Research
[2] Leibniz Institute of Plant Genetics and Crop Plant Research (IPK),Department of Genebank
来源
Scientific Data | / 5卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
The scarce knowledge on phenotypic characterization restricts the usage of genetic diversity of plant genetic resources in research and breeding. We describe original and ready-to-use processed data for approximately 60% of ~22,000 barley accessions hosted at the Federal ex situ Genebank for Agricultural and Horticultural Plant Species. The dataset gathers records for three traits with agronomic relevance: flowering time, plant height and thousand grain weight. This information was collected for seven decades for winter and spring barley during the seed regeneration routine. The curated data represent a source for research on genetics and genomics of adaptive and yield related traits in cereals due to the importance of barley as model organism. This data could be used to predict the performance of non-phenotyped individuals in other collections through genomic prediction. Moreover, the dataset empowers the utilization of phenotypic diversity of genetic resources for crop improvement.
引用
收藏
相关论文
共 50 条
  • [31] THE PRESS AS A SOURCE OF SOCIO-HISTORICAL DATA - ISSUES IN THE METHODOLOGY OF DATA-COLLECTION FROM NEWSPAPERS
    FRANZOSI, R
    HISTORICAL METHODS, 1987, 20 (01): : 5 - 16
  • [32] Recommendations From the International Stroke Genetics Consortium, Part 1 Standardized Phenotypic Data Collection
    Majersik, Jennifer J.
    Cole, John W.
    Golledge, Jonathan
    Rost, Natalia S.
    Chan, Yu-Feng Yvonne
    Gurol, M. Edip
    Lindgren, Arne G.
    Woo, Daniel
    Fernandez-Cadenas, Israel
    Chen, Donna T.
    Thijs, Vincent
    Worrall, Bradford B.
    Kamal, Ayeesha
    Bentley, Paul
    Wardlaw, Joanna M.
    Ruigrok, Ynte M.
    Battey, Thomas W. K.
    Schmidt, Reinhold
    Montaner, Joan
    Giese, Anne-Katrin
    Roquer, Jaume
    Jimenez-Conde, Jordi
    Lee, Chaeyoung
    Ay, Hakan
    Jose Martin, Juan
    Rosand, Jonathan
    Maguire, Jane
    STROKE, 2015, 46 (01) : 279 - +
  • [33] Biological properties of some autochthonous apple genotypes from the ex situ collection of Fruit Research Institute - Cacak
    Maric, S.
    Lukic, M.
    Radicevic, S.
    Dordevic, M.
    III BALKAN SYMPOSIUM ON FRUIT GROWING, 2016, 1139 : 123 - 130
  • [34] Regeneration and characterization of Swertia chirata Buch.-Ham. ex Wall. plants from immature seed cultures
    Chaudhuri, Rituparna Kundu
    Pal, Amita
    Jha, Timir Baran
    SCIENTIA HORTICULTURAE, 2009, 120 (01) : 107 - 114
  • [35] Landfill gas collection efficiency: Categorization of data from existing in-situ measurements
    Giordano, Charles R.
    Van Brunt, Michael E.
    Halevi, Shanee J.
    Castaldi, Marco J.
    Orlovits, Zsanett
    Illes, Zoltan
    WASTE MANAGEMENT, 2024, 175 : 83 - 91
  • [36] Repeatability analysis in an ex situ collection of camu-camu [Myrciaria dubia Kunh (McVaugh)] from the Peruvian Amazon
    Pinedo-Panduro, Mario
    Alves-Chagas, Edvan
    Paredes-Davila, Elvis
    Abanto-Rodriguez, Carlos
    Bardales-Lozano, Ricardo
    Cardoso-Chagas, Pollyana
    Ferreira-Melo, Valdinar
    Collazos Saldana, Herman
    Panduro Tenazoa, Nadia Masaya
    CIENCIA AMAZONICA, 2020, 8 (02): : 221 - 238
  • [37] Ex situ germination of European acorns: data from 93 batches of 12 Quercus species
    Medina, Maria
    Reyes-Martin, Marino P.
    Levy, Laura
    Lazaro-Gonzalez, Alba
    Andivia, Enrique
    Annighoefer, Peter
    Assaad, Farhah
    Bauhus, Juergen
    Benavides, Raquel
    Bohlenius, Henrik
    Cambria, Vito E.
    Carbonero, Maria D.
    Castro, Jorge
    Chalatashvili, Akaki
    Chiatante, Donato
    Cocozza, Claudia
    Corticeiro, Sofia
    Lazdina, Dagnija
    De Dato, Giovanbattista
    De Sanctis, Michele
    Devetakovic, Jovana
    Drossler, Lars
    Ehrenbergerova, Lenka
    Ferus, Peter
    Gomez-Aparicio, Lorena
    Hampe, Arndt
    Hanssen, Kjersti H.
    Heinze, Berthold
    Jakubowski, Marcin
    Jimenez, Maria N.
    Kanjevac, Branko
    Keizer, Jan J.
    Kerkez-Jankovic, Ivona
    Klisz, Marcin
    Kowalkowski, Wojciech
    Kremer, Klaus
    Kroon, Johan
    La Montagna, Dario
    Lazarevic, Jelena
    Lingua, Emanuele
    Lucas-Borja, Manuel E.
    Lukowski, Adrian
    Lof, Magnus
    Maia, Paula
    Mairota, Paola
    Maltoni, Alberto
    Mariotti, Barbara
    Martinik, Antonin
    Marzano, Raffaella
    Matias, Luis
    ANNALS OF FOREST SCIENCE, 2024, 81 (01)
  • [38] Insights from a century of data reveal global trends in ex situ living plant collections
    Cano, Angela
    Powell, Jake
    Aiello, Anthony S.
    Andersen, Heidi Lie
    Arbour, Thomas
    Balzer, Aleisha
    Bauer, Dennise Stefan
    Bugarchich, Jeremy
    Cano, Fernando
    Contreras, Maria Paula
    Cubey, Robert
    Czajkowski, Ignacio
    Diaz-Toribio, Milton H.
    Freeth, Thomas
    Freyre, Nicolas
    Gardner, Martin F.
    Griffith, M. Patrick
    Gustafsson, A. Lovisa S.
    Havstroem, Mats
    Hockley, Leslie R.
    Hollingsworth, Peter M.
    Jorgensen, Tina
    Kindl, Kristen
    Kirkwood, Donovan
    Larpin, Denis
    Lofthus, Oystein
    Loehne, Cornelia
    Lopez-Villalobos, Adriana
    Luscombe, Dan
    Molloy, Dermot
    Morales-Rozo, Clara
    Naburga, Inese
    Nebot, Anna
    Neinhuis, Christoph
    Newlander, Cindy S.
    Ossaer, Joke
    Payton, Greg
    Peter, Jon
    Martinez, Raul Puente
    Scheen, Anne-Cathrine
    Scherberich, David
    Senekal, Anna Maria
    Shearman, Clare
    Siemon, John
    Socher, Stephanie A.
    Sucher, Rebecca
    Summers, Alex
    Lima, Joanna M. Tucker
    Vry, Alison
    Wong, Jessica
    NATURE ECOLOGY & EVOLUTION, 2025, 9 (02): : 214 - 224
  • [39] Genomic prediction models trained with historical records enable populating the German ex situ genebank bio-digital resource center of barley (Hordeum sp.) with information on resistances to soilborne barley mosaic viruses
    Maria Y. Gonzalez
    Yusheng Zhao
    Yong Jiang
    Nils Stein
    Antje Habekuss
    Jochen C. Reif
    Albert W. Schulthess
    Theoretical and Applied Genetics, 2021, 134 : 2181 - 2196
  • [40] Genomic prediction models trained with historical records enable populating the German ex situ genebank bio-digital resource center of barley (Hordeum sp.) with information on resistances to soilborne barley mosaic viruses
    Gonzalez, Maria Y.
    Zhao, Yusheng
    Jiang, Yong
    Stein, Nils
    Habekuss, Antje
    Reif, Jochen C.
    Schulthess, Albert W.
    THEORETICAL AND APPLIED GENETICS, 2021, 134 (07) : 2181 - 2196