The structure of I-Crel, a Group I intron-encoded homing endonuclease

被引:0
|
作者
Patrick J. Heath
Kathryn M. Stephens
Raymond J. Monnat
Barry L. Stoddard
机构
[1] Fred Hutchinson Cancer Research Center,
[2] Program in Structural Biology,undefined
[3] Division of Basic Sciences,undefined
[4] University of Washington,undefined
[5] Department of Pathology,undefined
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
The structure of I-Crel provides the first view of a protein encoded by a gene within an intron. This endonuclease recognizes a long DNA site ∼20 base pairs in length and facilitates the lateral transfer of that intron. The protein exhibits a DNA-binding surface consisting of four antiparallel β-strands that form a 20 Å wide groove which is over 70 Å long. The architecture of this fold is different from that of the TATA binding protein, TBP, which also contains an antiparallel β-saddle. The conserved LAGLIDADG motif, which is found in many mobile intron endonucleases, maturases and inteins, forms a novel helical interface and contributes essential residues to the active site.
引用
收藏
页码:468 / 476
页数:8
相关论文
共 50 条
  • [41] A COMPREHENSIVE CHARACTERIZATION OF INTERACTIONS BETWEEN THE TD INTRON-ENCODED ENDONUCLEASE AND ITS HOMING-SITE TARGET
    MUELLER, JE
    BRYK, M
    LOIZOS, N
    QUIRK, SM
    BELFORT, M
    JOURNAL OF CELLULAR BIOCHEMISTRY, 1993, : 174 - 174
  • [42] Recruitment of intron-encoded and co-opted proteins in splicing of the bI3 group I intron RNA
    Bassi, GS
    de Oliveira, DM
    White, MF
    Weeks, KM
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (01) : 128 - 133
  • [43] Use of RmInt1, a Group IIB Intron Lacking the Intron-Encoded Protein Endonuclease Domain, in Gene Targeting
    Garcia-Rodriguez, Fernando M.
    Barrientos-Duran, Antonio
    Diaz-Prado, Vanessa
    Fernandez-Lopez, Manuel
    Toro, Nicolas
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2011, 77 (03) : 854 - 861
  • [44] In vivo analysis of the relationships between the splicing and homing activities of a group I intron-encoded I-ScaI/bi2-maturase of Saccharomyces capensis produced in the yeast cytoplasm
    Szczepanek, Tomasz
    Gora, Monika
    Monteilhet, Claude
    Wysocka, Monika
    Lazowska, Jaga
    Golik, Pawel
    FEMS YEAST RESEARCH, 2006, 6 (05) : 823 - 835
  • [45] I-Apel:: a novel intron-encoded LAGLIDADG homing endonuclease from the archaeon, Aeropyrum pernix K1 -: art. no. e116
    Nomura, N
    Morinaga, Y
    Shirai, N
    Sako, Y
    NUCLEIC ACIDS RESEARCH, 2005, 33 (13) : 1 - 8
  • [46] I-PfoP3I: A Novel Nicking HNH Homing Endonuclease Encoded in the Group I Intron of the DNA Polymerase Gene in Phormidium foveolarum Phage Pf-WMP3
    Kong, Shuanglei
    Liu, Xinyao
    Fu, Liwen
    Yu, Xiangchun
    An, Chengcai
    PLOS ONE, 2012, 7 (08):
  • [47] PURIFICATION AND CHARACTERIZATION OF THE INVITRO ACTIVITY OF I-SCE-I, A NOVEL AND HIGHLY SPECIFIC ENDONUCLEASE ENCODED BY A GROUP-I INTRON
    MONTEILHET, C
    PERRIN, A
    THIERRY, A
    COLLEAUX, L
    DUJON, B
    NUCLEIC ACIDS RESEARCH, 1990, 18 (06) : 1407 - 1413
  • [48] I-PpoI, the endonuclease encoded by the group I intron PpLSU3, is expressed from an RNA polymerase I transcript
    Lin, J
    Vogt, VM
    MOLECULAR AND CELLULAR BIOLOGY, 1998, 18 (10) : 5809 - 5817
  • [49] I-ApeI, a novel intron-encoded LAGLIDADG homing endonuclease from the archaeon, Aeropyrum pernix K1 (vol 33, pg e116, 2005)
    Nomura, N
    Morinaga, Y
    Shirai, N
    Sako, Y
    NUCLEIC ACIDS RESEARCH, 2005, 33 (15) : 5017 - 5017
  • [50] CRYSTALLOGRAPHIC STUDIES OF THE ARCHAEAL INTRON ENCODED ENDONUCLEASE I-DmoIl
    Silva, George H.
    Dalgaard, Jacob Z.
    Belfort, Marlene
    Van Roey, Patrick
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 1996, 52 : C159 - C159