A pan-cancer analysis of anti-proliferative protein family genes for therapeutic targets in cancer

被引:0
|
作者
Siming Zhang
Jue Gu
Ling-ling Shi
Bo Qian
Xun Diao
Xiaohui Jiang
Jindong Wu
Zhijun Wu
Aiguo Shen
机构
[1] Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University,Cancer Research Center Nantong
[2] Affiliated Hospital of Nantong University,Department of General Surgery
[3] Affiliated Nantong Hospital Third of Nantong University,Department of Oncology
[4] Maternal and Child Care Hospital of Qidong,undefined
[5] Nantong Tumor Hospital and Affiliated Tumor Hospital of Nantong University,undefined
[6] Nantong Traditional Chinese Medicine Hospital,undefined
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
The recently discovered APRO (anti-proliferative protein) family encodes a group of trans-membrane glycoproteins and includes 6 members: TOB1, TOB2, BTG1, BTG2, BTG3 and BTG4. The APRO family is reportedly associated with the initiation and progression of cancers. This study aims to undertake a comprehensive investigation of the APRO family of proteins as a prognostic biomarker in various human tumors. We performed a pan-cancer analysis of the APRO family based on The Cancer Genome Atlas (TCGA). With the bioinformatics methods, we explored the prognostic value of the APRO family and the correlation between APRO family expression and tumor mutation burden (TMB), microsatellite instability (MSI), drug sensitivity, and immunotherapy in numerous cancers. Our results show that the APRO family was primarily down-regulated in cancer samples. The expression of APRO family members was linked with patient prognosis. In addition, APRO family genes showed significant association with immune infiltrate subtypes, tumor microenvironment, and tumor cell stemness. Finally, our study also demonstrated the relationship between APRO family genes and drug sensitivity. This study provides comprehensive information to understand the APRO family’s role as an oncogene and predictor of survival in some tumor types.
引用
收藏
相关论文
共 50 条
  • [21] PAN-CANCER PROFILES OF BRAIN METASTASES: PRIORITIZATION OF THERAPEUTIC TARGETS
    Ferguson, Sherise
    Zheng, Siyuan
    Xiu, Joanne
    Zhou, Shouhao
    Khasraw, Mustafa
    Brastianos, Priscilla K.
    Kesari, Santosh
    Hu, Jethro
    Rudnick, Jeremy
    Salacz, Michael
    Piccioni, David
    Suyun, Huang
    Davies, Micheal
    Glitza, Isabella
    Heymach, John
    Zhang, Jianjun
    Ibrahim, Nuhad
    de Groot, John
    McCarty, Joseph
    O'Brien, Barbara J.
    Sawaya, Raymond
    Verhaak, Roel
    Reddy, Sandeep
    Priebe, Waldemar
    Spetzler, David
    Heimberger, Amy
    NEURO-ONCOLOGY, 2017, 19 : 40 - 41
  • [22] A pan-cancer analysis of EphA family gene expression and its association with prognosis, tumor microenvironment, and therapeutic targets
    Cui, Zhe
    Liu, Chengwang
    Wang, Xuechao
    Xiang, Yiping
    FRONTIERS IN ONCOLOGY, 2024, 14
  • [23] Pan-cancer analysis of the deoxyribonuclease gene family
    Bai, Qingquan
    He, Xiao
    Hu, Tianhui
    MOLECULAR AND CLINICAL ONCOLOGY, 2023, 18 (03)
  • [24] Pan-cancer analysis revealed the significance of the GTPBP family in cancer
    Hu, Yiming
    Chen, Liang
    Tang, Qikai
    Wei, Wei
    Cao, Yuan
    Xie, Jiaheng
    Ji, Jing
    AGING-US, 2022, 14 (06): : 2558 - 2573
  • [25] Pan-cancer analysis reveals the potential of hyaluronate synthase as therapeutic targets in human tumors
    Bao, Xunxia
    Ran, Juan
    Kong, Chuifang
    Wan, Zunxi
    Wang, Juling
    Yu, Tengfei
    Ruan, Shengming
    Ding, Wenjing
    Xia, Leiming
    Zhang, Daoxiang
    HELIYON, 2023, 9 (08)
  • [26] Pan-cancer analysis of the CASP gene family in relation to survival, tumor-infiltrating immune cells and therapeutic targets
    Hong, Weifeng
    Gu, YuJun
    Guan, RenGuo
    Xie, Daipeng
    Zhou, Haiyu
    Yu, Min
    GENOMICS, 2020, 112 (06) : 4304 - 4315
  • [27] FAM3 family genes are associated with prognostic value of human cancer: a pan-cancer analysis
    Qing-Tai Dong
    Dan-Dan Ma
    Qi Gong
    Zhen-Yu Lin
    Zhong-Hu Li
    Jia-Xin Ye
    Chun-Hui Qin
    Wei-Dong Jin
    Jian-Xin Zhang
    Zhi-Yong Zhang
    Scientific Reports, 13
  • [28] FAM3 family genes are associated with prognostic value of human cancer: a pan-cancer analysis
    Dong, Qing-Tai
    Ma, Dan-Dan
    Gong, Qi
    Lin, Zhen-Yu
    Li, Zhong-Hu
    Ye, Jia-Xin
    Qin, Chun-Hui
    Jin, Wei-Dong
    Zhang, Jian-Xin
    Zhang, Zhi-Yong
    SCIENTIFIC REPORTS, 2023, 13 (01)
  • [29] Identification of Cancer Trait Genes and Association Analysis Under Pan-Cancer
    Wang, Shudong
    Zhang, Yuanyuan
    Mu, Hongting
    Pang, Shanchen
    CURRENT BIOINFORMATICS, 2021, 16 (08) : 1101 - 1114
  • [30] Pan-cancer analysis of somatic mutations in miRNA genes
    Urbanek-Trzeciak, Martyna O.
    Galka-Marciniak, Paulina
    Nawrocka, Paulina M.
    Kowal, Ewelina
    Szwec, Sylwia
    Giefing, Maciej
    Kozlowski, Piotr
    EBIOMEDICINE, 2020, 61