Multiple structure alignment with msTALI

被引:0
|
作者
Paul Shealy
Homayoun Valafar
机构
[1] University of South Carolina,Department of Computer Science and Engineering
来源
关键词
Torsion Angle; Structure Alignment; Core Size; Common Core; Surface Accessibility;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Alignment of multiple protein structures based on sequence and structure features
    Madhusudhan, M. S.
    Webb, Benjamin M.
    Marti-Renom, Marc A.
    Eswar, Narayanan
    Sali, Andrej
    PROTEIN ENGINEERING DESIGN & SELECTION, 2009, 22 (09): : 569 - 574
  • [22] Protein multiple alignment incorporating primary and secondary structure information
    Kim, Nak-Kyeong
    Xie, Jun
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2006, 13 (10) : 1735 - 1748
  • [23] CE-MC: a multiple protein structure alignment server
    Guda, C
    Lu, SF
    Scheeff, ED
    Bourne, PE
    Shindyalov, IN
    NUCLEIC ACIDS RESEARCH, 2004, 32 : W100 - W103
  • [24] Defining and computing optimum RMSD for gapped multiple structure alignment
    Wang, Xueyi
    Snoeyink, Jack
    ALGORITHMS IN BIOINFORMATICS, PROCEEDINGS, 2007, 4645 : 196 - +
  • [25] A new progressive-iterative algorithm for multiple structure alignment
    Lupyan, D
    Leo-Macias, A
    Ortiz, AR
    BIOINFORMATICS, 2005, 21 (15) : 3255 - 3263
  • [26] Integrating protein secondary structure prediction and multiple sequence alignment
    Simossis, VA
    Heringa, J
    CURRENT PROTEIN & PEPTIDE SCIENCE, 2004, 5 (04) : 249 - 266
  • [27] Matt: Local flexibility aids protein multiple structure alignment
    Menke, Matthew
    Berger, Bonnie
    Cowen, Lenore
    PLOS COMPUTATIONAL BIOLOGY, 2008, 4 (01) : 0088 - 0099
  • [28] CAALIGN:: a program for pairwise and multiple protein-structure alignment
    Oldfield, T. J.
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2007, 63 : 514 - 525
  • [29] Multiple flexible structure alignment using partial order graphs
    Ye, YZ
    Godzik, A
    BIOINFORMATICS, 2005, 21 (10) : 2362 - 2369
  • [30] Caretta - A multiple protein structure alignment and feature extraction suite
    Akdel, Mehmet
    Durairaj, Janani
    de Ridder, Dick
    van Dijk, Aalt D. J.
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2020, 18 : 981 - 992