RNA-Seq for the detection of gene fusions in solid tumors: development and validation of the JAX FusionSeq™ 2.0 assay

被引:0
|
作者
Daniel Bergeron
Harshpreet Chandok
Qian Nie
Matthew Prego
Melissa Soucy
Kevin Kelly
Guruprasad Ananda
Andrew Hesse
Honey V. Reddi
机构
[1] The Jackson Laboratory,Clinical Genomics Laboratory
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
页码:323 / 335
页数:12
相关论文
共 50 条
  • [41] Detection of NRG1 Gene Fusions in Solid Tumors
    Jonna, Sushma
    Feldman, Rebecca A.
    Swensen, Jeffrey
    Gatalica, Zoran
    Korn, Wolfgang M.
    Borghaei, Hossein
    Ma, Patrick C.
    Nieva, Jorge J.
    Spira, Alexander I.
    Vanderwalde, Ari M.
    Wozniak, Antoinette J.
    Kim, Edward S.
    Liu, Stephen V.
    CLINICAL CANCER RESEARCH, 2019, 25 (16) : 4966 - 4972
  • [42] Gene Fusion Detection By RNA-Seq in Acute Myeloid Leukemia (AML)
    Kerbs, Paul
    Batcha, Aarif Mohamed Nazeer
    Vosberg, Sebastian
    Metzler, Dirk
    Herold, Tobias
    Greif, Philipp A.
    BLOOD, 2019, 134
  • [43] Gene Fusion Detection by RNA-SEQ In Acute Myeloid Leukemia (AML)
    Kerbs, P.
    Batcha, A. M. Nazeer
    Vosberg, S.
    Metzler, D.
    Herold, Tobias
    Greif, P. A.
    ANNALS OF HEMATOLOGY, 2019, 98 : S25 - S26
  • [44] Actionable fusions detected by RNA-seq co-occur with PD-L1 expression and driver mutations in solid tumors patients
    Shin, Miyoung
    Petersen, Paris
    Lau-Rivera, Steven
    Jung, Segun
    Agersborg, Sally
    Hechtman, Jacyln
    Lopez-Diaz, Fernando
    Funari, Vincent
    CANCER RESEARCH, 2022, 82 (12)
  • [45] HGCA2.0: An RNA-Seq Based Webtool for Gene Coexpression Analysis in Homo sapiens
    Zogopoulos, Vasileios L.
    Malatras, Apostolos
    Kyriakidis, Konstantinos
    Charalampous, Chrysanthi
    Makrygianni, Evanthia A.
    Duguez, Stephanie
    Koutsi, Marianna A.
    Pouliou, Marialena
    Vasileiou, Christos
    Duddy, William J.
    Agelopoulos, Marios
    Chrousos, George P.
    Iconomidou, Vassiliki A.
    Michalopoulos, Ioannis
    CELLS, 2023, 12 (03)
  • [46] Development and Validation of an RNA Sequencing Assay for Gene Fusion Detection in Formalin-Fixed, Paraffin-Embedded Tumors
    Peng, Hao
    Huang, Rong
    Wang, Kui
    Wang, Cuiyun
    Li, Bin
    Guo, Youbing
    Li, Meng
    Zhang, Dadong
    Dong, Hua
    Chen, Hao
    Chen, Caifu
    Xu, Qing
    Li, Fugen
    Tian, Lei
    Wu, Jianbing
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2021, 23 (02): : 223 - 233
  • [47] Experimental validation of methods for differential gene expression analysis and sample pooling in RNA-seq
    Anto P. Rajkumar
    Per Qvist
    Ross Lazarus
    Francesco Lescai
    Jia Ju
    Mette Nyegaard
    Ole Mors
    Anders D. Børglum
    Qibin Li
    Jane H. Christensen
    BMC Genomics, 16
  • [48] Experimental validation of methods for differential gene expression analysis and sample pooling in RNA-seq
    Rajkumar, Anto P.
    Qvist, Per
    Lazarus, Ross
    Lescai, Francesco
    Ju, Jia
    Nyegaard, Mette
    Mors, Ole
    Borglum, Anders D.
    Li, Qibin
    Christensen, Jane H.
    BMC GENOMICS, 2015, 16
  • [49] An RNA Sequencing Panel for Detection of Fusions and Splice Site Variants in Solid Tumors
    Green, D.
    Tafe, L.
    Deharvengt, S.
    Winnick, K.
    Tsongalis, G.
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2020, 22 (11): : S69 - S70
  • [50] Empirical Bayes Analysis of RNA-seq Data for Detection of Gene Expression Heterosis
    Jarad Niemi
    Eric Mittman
    Will Landau
    Dan Nettleton
    Journal of Agricultural, Biological, and Environmental Statistics, 2015, 20 : 614 - 628