Uncovering deeply conserved motif combinations in rapidly evolving noncoding sequences

被引:0
|
作者
Caroline Jane Ross
Aviv Rom
Amit Spinrad
Dikla Gelbard-Solodkin
Neta Degani
Igor Ulitsky
机构
[1] Weizmann Institute of Science,Department of Biological Regulation
来源
关键词
Long noncoding RNA; Molecular evolution; Homology; Integer linear programming; OIP5-AS1; CHD2; CHASERR; MicroRNA; 3′UTR;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Purifying selection maintains highly conserved Noncoding sequences in Drosophila
    Casillas, Sonia
    Barbadilla, Antonio
    Bergman, Casey M.
    MOLECULAR BIOLOGY AND EVOLUTION, 2007, 24 (10) : 2222 - 2234
  • [22] Identification and characterization of new long conserved noncoding sequences in vertebrates
    Sakuraba, Yoshiyuki
    Kimura, Toru
    Masuya, Hiroshi
    Noguchi, Hideki
    Sezutsu, Hideki
    Takahasi, K. Ryo
    Toyoda, Atsushi
    Fukumura, Ryutaro
    Murata, Takuya
    Sakaki, Yoshiyuki
    Yamamura, Masayuki
    Wakana, Shigeharu
    Noda, Tetsuo
    Shiroishi, Toshihiko
    Gondo, Yoichi
    MAMMALIAN GENOME, 2008, 19 (10-12) : 703 - 712
  • [23] Identification and characterization of new long conserved noncoding sequences in vertebrates
    Yoshiyuki Sakuraba
    Toru Kimura
    Hiroshi Masuya
    Hideki Noguchi
    Hideki Sezutsu
    K. Ryo Takahasi
    Atsushi Toyoda
    Ryutaro Fukumura
    Takuya Murata
    Yoshiyuki Sakaki
    Masayuki Yamamura
    Shigeharu Wakana
    Tetsuo Noda
    Toshihiko Shiroishi
    Yoichi Gondo
    Mammalian Genome, 2008, 19 : 703 - 712
  • [24] Conserved noncoding sequences are selectively constrained and not mutation cold spots
    Drake, JA
    Bird, C
    Nemesh, J
    Thomas, DJ
    Newton-Cheh, C
    Reymond, A
    Excoffier, L
    Attar, H
    Antonarakis, SE
    Dermitzakis, ET
    Hirschhorn, JN
    NATURE GENETICS, 2006, 38 (02) : 223 - 227
  • [25] Disruption Index in Otolaryngology: Uncovering a Bibliometric History of a Rapidly Evolving Field
    Sheth, Amar H.
    Hengartner, Astrid
    Abdou, Hisham
    Salehi, Parsa P.
    Becerra, Adan Z.
    Lerner, Michael Z.
    LARYNGOSCOPE, 2024, 134 (02): : 629 - 636
  • [26] Conserved noncoding sequences are selectively constrained and not mutation cold spots
    Jared A Drake
    Christine Bird
    James Nemesh
    Daryl J Thomas
    Christopher Newton-Cheh
    Alexandre Reymond
    Laurent Excoffier
    Homa Attar
    Stylianos E Antonarakis
    Emmanouil T Dermitzakis
    Joel N Hirschhorn
    Nature Genetics, 2006, 38 : 223 - 227
  • [27] Conserved noncoding sequences conserve biological networks and influence genome evolution
    Xie, Jianbo
    Qian, Kecheng
    Si, Jingna
    Xiao, Liang
    Ci, Dong
    Zhang, Deqiang
    HEREDITY, 2018, 120 (05) : 437 - 451
  • [28] Long Conserved Noncoding Sequences (LCNS) are not mutational cold spots.
    Sakuraba, Yoshiyuki
    Kimura, Toru
    Noguchi, Hideki
    Masuya, Hiroshi
    Sezutsu, Hideki
    Takahasi, Ryo
    Toyoda, Atsushi
    Sakaki, Yoshiyuki
    Fukumura, Ryutaro
    Murata, Takuya
    Fujimoto, Naomi
    Motoi, Rika
    Wakana, Shigeharu
    Noda, Tetsuo
    Shiroishi, Toshihiko
    Gondo, Yoichi
    GENES & GENETIC SYSTEMS, 2006, 81 (06) : 449 - 449
  • [29] Conserved noncoding sequences conserve biological networks and influence genome evolution
    Jianbo Xie
    Kecheng Qian
    Jingna Si
    Liang Xiao
    Dong Ci
    Deqiang Zhang
    Heredity, 2018, 120 : 437 - 451
  • [30] A Collection of Conserved Noncoding Sequences to Study Gene Regulation in Flowering Plants
    Van de Velde, Jan
    Van Bel, Michiel
    Vaneechoutte, Dries
    Vandepoele, Klaas
    PLANT PHYSIOLOGY, 2016, 171 (04) : 2586 - 2598