Family-based association tests for quantitative traits using pooled DNA

被引:0
|
作者
Joel S Bader
Pak Sham
机构
[1] CuraGen Corporation,Department of Psychological Medicine
[2] Institute of Psychiatry,undefined
[3] King's College,undefined
[4] Social,undefined
[5] Genetic and Developmental Psychiatry Research Centre,undefined
[6] Institute of Psychiatry,undefined
[7] King's College,undefined
来源
关键词
association; linkage; quantitative trait locus (QTL); single-nucleotide polymorphism (SNP); DNA pooling; genotyping;
D O I
暂无
中图分类号
学科分类号
摘要
Interest in whole-genome QTL mapping has spurred efforts to reduce the cost of studies now based primarily on individual genotyping. Pooled DNA tests are a possible solution, and understanding how measurement error affects test power could assist in study design. Here we describe pooled tests explicitly optimised for measurement error, including family-based tests robust to population stratification. Our results suggest that pooled DNA whole-genome screens may be feasible with current instruments.
引用
收藏
页码:870 / 878
页数:8
相关论文
共 50 条
  • [21] EFBAT: exact family-based association tests
    Kady Schneiter
    James H Degnan
    Christopher Corcoran
    Xin Xu
    Nan Laird
    [J]. BMC Genetics, 8
  • [22] Family-based tests of association in the presence of linkage
    Lake, SL
    Blacker, D
    Laird, NM
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2000, 67 (06) : 1515 - 1525
  • [23] EFBAT: exact family-based association tests
    Schneiter, Kady
    Degnan, James H.
    Corcoran, Christopher
    Xu, Xin
    Laird, Nan
    [J]. BMC GENETICS, 2007, 8 (1)
  • [24] A Family-based Association Test for Quantitative Traits to Detect Gene-Gene Interactions
    De Lobel, L.
    De Meyer, H.
    Thijs, L.
    Kouznetsova, T.
    Staessen, J.
    Van Steen, K.
    [J]. GENETIC EPIDEMIOLOGY, 2008, 32 (07) : 686 - 686
  • [25] Leveraging population information in family-based rare variant association analyses of quantitative traits
    Jiang, Yu
    Ji, Yunqi
    Sibley, Alexander B.
    Li, Yi-Ju
    Allen, Andrew S.
    [J]. GENETIC EPIDEMIOLOGY, 2017, 41 (02) : 98 - 107
  • [26] Family-based tests for association using discordant sib pairs.
    Langefeld, CD
    Pericak-Vance, MA
    Saunders, AM
    Boehnke, M
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 1997, 61 (04) : A282 - A282
  • [27] On dichotomizing phenotypes in family-based association tests:: Quantitative phenotypes are not always the optimal choice
    Fardo, David
    Celedon, Juan C.
    Raby, Benjamin A.
    Weiss, Scott T.
    Lange, Christoph
    [J]. GENETIC EPIDEMIOLOGY, 2007, 31 (05) : 376 - 382
  • [28] A Generalized Family-Based Association Test for Dichotomous Traits
    Chen, Wei-Min
    Manichaikul, Ani
    Rich, Stephen S.
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2009, 85 (03) : 364 - 376
  • [29] Implementing a unified approach to family-based tests of association
    Laird, NM
    Horvath, S
    Xu, X
    [J]. GENETIC EPIDEMIOLOGY, 2000, 19 : S36 - S42
  • [30] Family-based association tests incorporating parental genotypes
    Kraft, P
    Wilson, M
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2002, 71 (05) : 1238 - 1239