Efficient iterative virtual screening with Apache Spark and conformal prediction

被引:0
|
作者
Laeeq Ahmed
Valentin Georgiev
Marco Capuccini
Salman Toor
Wesley Schaal
Erwin Laure
Ola Spjuth
机构
[1] Royal Institute of Technology (KTH),Department of Computational Science and Technology
[2] Uppsala University,Department of Pharmaceutical Biosciences
[3] Uppsala University,Department of Information Technology
来源
关键词
Virtual screening; Docking; Conformal prediction; Cloud computing; Apache Spark;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] A gray-box modeling methodology for runtime prediction of Apache Spark jobs
    Al-Sayeh, Hani
    Hagedorn, Stefan
    Sattler, Kai-Uwe
    Al-Sayeh, Hani (hani-bassam.al-sayeh@tu-ilmenau.de); Hagedorn, Stefan (stefan.hagedorn@tu-ilmenau.de), 1600, Springer (38): : 819 - 839
  • [32] An Enhanced Parallelisation Model for Performance Prediction of Apache Spark on a Multinode Hadoop Cluster
    Ahmed, Nasim
    Barczak, Andre L. C.
    Rashid, Mohammad A.
    Susnjak, Teo
    BIG DATA AND COGNITIVE COMPUTING, 2021, 5 (04)
  • [33] A gray-box modeling methodology for runtime prediction of Apache Spark jobs
    Al-Sayeh, Hani
    Hagedorn, Stefan
    Sattler, Kai-Uwe
    DISTRIBUTED AND PARALLEL DATABASES, 2020, 38 (04) : 819 - 839
  • [34] Prediction of Drug Target Sensitivity in Cancer Cell Lines Using Apache Spark
    Hussain, Shahid
    Ferzund, Javed
    Raza-Ul-Haq
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2019, 26 (08) : 882 - 889
  • [35] Using Iterative MapReduce for Parallel Virtual Screening
    Ahmed, Laeeq
    Edlund, Ake
    Laure, Erwin
    Spjuth, Ola
    2013 IEEE FIFTH INTERNATIONAL CONFERENCE ON CLOUD COMPUTING TECHNOLOGY AND SCIENCE (CLOUDCOM), VOL 2, 2013, : 27 - 32
  • [36] Effective Prediction of Missing Data on Apache Spark over Multivariable Time Series
    Shi, Weiwei
    Zhu, Yongxin
    Yu, Philip S.
    Zhang, Jiawei
    Huang, Tian
    Wang, Chang
    Chen, Yufeng
    IEEE TRANSACTIONS ON BIG DATA, 2018, 4 (04) : 473 - 486
  • [37] Scaling Machine Learning for Target Prediction in Drug Discovery using Apache Spark
    Harnie, Dries
    Vapirev, Alexander E.
    Wegner, Jorg Kurt
    Gedich, Andrey
    Steijaert, Marvin
    Wuyts, Roel
    De Meuter, Wolfgang
    2015 15TH IEEE/ACM INTERNATIONAL SYMPOSIUM ON CLUSTER, CLOUD AND GRID COMPUTING, 2015, : 871 - 879
  • [38] Scaling machine learning for target prediction in drug discovery using Apache Spark
    Harnie, Dries
    Saey, Mathijs
    Vapirev, Alexander E.
    Wegner, Jorg Kurt
    Gedich, Andrey
    Steijaert, Marvin
    Ceulemans, Hugo
    Wuyts, Roel
    De Meuter, Wolfgang
    FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE, 2017, 67 : 409 - 417
  • [39] A gray-box modeling methodology for runtime prediction of Apache Spark jobs
    Hani Al-Sayeh
    Stefan Hagedorn
    Kai-Uwe Sattler
    Distributed and Parallel Databases, 2020, 38 : 819 - 839
  • [40] LPW: an efficient data-aware cache replacement strategy for Apache Spark
    Hui Li
    Shuping Ji
    Hua Zhong
    Wei Wang
    Lijie Xu
    Zhen Tang
    Jun Wei
    Tao Huang
    Science China Information Sciences, 2023, 66