Spectral analysis for identification and visualization of repeats in genetic sequences

被引：2

作者：

Pankratov A.N. ^{[1
]}

Gorchakov M.A. ^{[1
]}

Dedus F.F. ^{[1
]}

Dolotova N.S. ^{[1
]}

Kulikova L.I. ^{[1
]}

Makhortykh S.A. ^{[1
]}

Nazipova N.N. ^{[1
]}

Novikova D.A. ^{[1
]}

Olshevets M.M. ^{[1
]}

Pyatkov M.I. ^{[1
]}

Rudnev V.R. ^{[1
]}

Tetuev R.K. ^{[1
]}

Filippov V.V. ^{[1
]}

机构：

[1] Institute of Mathematical Problems of Biology, Russian Academy of Sciences, Puschino, Moscow oblast 142290

来源：

Pattern Recognition and Image Analysis | 2009年 / 19卷 / 04期

基金：

俄罗斯基础研究基金会;

关键词：

Direct and inverted repeats; Orthogonal polynomials; Spectral indexing;

D O I：

10.1134/S105466180904018X

中图分类号：

学科分类号：

摘要：

The task of research on repeated segments in data sequences is considered in terms of genetic sequences. The principle of detection of repeats is offered based on comparison of specters of signal decomposition by classical orthogonal polynomials. The proposed approach can be applied in the search for extensive inexact repeats in different signals. © 2009 Pleiades Publishing, Ltd.

引用

页码：687 / 692

页数：5

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