Sequence variation in ligand binding sites in proteins

被引:0
|
作者
Thomas J Magliery
Lynne Regan
机构
[1] Yale University,Department of Molecular Biophysics & Biochemistry
[2] The Ohio State University,Department of Chemistry and Department of Biochemistry
[3] Yale University,Department of Chemistry
来源
关键词
Relative Entropy; Amino Acid Usage; Amino Acid Distribution; Sequence Entropy; Multinomial Probability;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Prediction of RNA binding sites in proteins from amino acid sequence
    Terribilini, Michael
    Lee, Jae-Hyung
    Yan, Changhui
    Jernigan, Robert L.
    Honavar, Vasant
    Dobbs, Drena
    RNA, 2006, 12 (08) : 1450 - 1462
  • [22] Identification of Protein-Ligand Binding Sites by Sequence Information and Ensemble Classifier
    Ding, Yijie
    Tang, Jijun
    Guo, Fei
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2017, 57 (12) : 3149 - 3161
  • [23] Spanning binding sites on allosteric proteins with polymer-linked ligand dimers
    Kramer, RH
    Karpen, JW
    NATURE, 1998, 395 (6703) : 710 - 713
  • [24] PocketDepth: A new depth based algorithm for identification of ligand binding sites in proteins
    Kalidas, Yeturu
    Chandra, Nagasuma
    JOURNAL OF STRUCTURAL BIOLOGY, 2008, 161 (01) : 31 - 42
  • [25] AUTOIMMUNE-LIKE ANTIBODIES TO LIGAND-BINDING SITES OF MYELOMA PROTEINS
    SIRISINHA, S
    EISEN, HN
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1971, 68 (12) : 3130 - +
  • [26] Motions of Allosteric and Orthosteric Ligand-Binding Sites in Proteins are Highly Correlated
    Ma, Xiaomin
    Meng, Hu
    Lai, Luhua
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2016, 56 (09) : 1725 - 1733
  • [27] Identification of ligand binding sites on proteins using a multi-scale approach
    Glick, M
    Robinson, DD
    Grant, GH
    Richards, WG
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (10) : 2337 - 2344
  • [28] Spanning binding sites on allosteric proteins with polymer-linked ligand dimers
    Richard H. Kramer
    Jeffrey W. Karpen
    Nature, 1998, 395 : 710 - 713
  • [29] QUANTITATIVE PLOT FOR DETERMINATION OF NEGATIVELY COOPERATIVE LIGAND-BINDING SITES IN PROTEINS
    SHINDLER, JS
    TIPTON, KF
    JOURNAL OF THEORETICAL BIOLOGY, 1978, 70 (03) : 315 - 321
  • [30] Patterns of sequence variation within the Neisseria meningitidis lactoferrin binding proteins
    Adamiak, Paul
    Beddek, Amanda J.
    Pajon, Rolando
    Schryvers, Anthony B.
    BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE, 2012, 90 (03): : 339 - 350