Analyzing and learning sparse and scale-free networks using Gaussian graphical models

被引:1
|
作者
Aslan M.S. [1 ]
Chen X.-W. [1 ]
Cheng H. [2 ]
机构
[1] Computer Science Department, Wayne State University, Detroit, 48202, MI
[2] University of Electronic Science and Technology of China, Chengdu, Sichuan
基金
美国国家科学基金会;
关键词
ADMM; Gaussian networks; Scale-free networks; Sparse precision matrix;
D O I
10.1007/s41060-016-0009-y
中图分类号
学科分类号
摘要
In this paper, we consider the problem of fitting a sparse precision matrix to multivariate Gaussian data. The zero elements in the precision matrix correspond to conditional independencies between variables. We focus on the estimation of a class of sparse precision matrix which represents the scale-free networks. It has been demonstrated that some of the important networks display features similar to scale-free graphs. We propose a new log-likelihood formulation, which promotes the sparseness of the precision matrix as well as the topological structure of scale-free networks. To optimize this new energy formulation, the alternating direction method of multipliers form is used with the general L1-regularized loss optimization. We tested our proposed method on various databases. Our proposed method exhibits better estimation performance with various number of samples, N, and different selection of sparsity parameter, ρ. © 2016, Springer International Publishing Switzerland.
引用
收藏
页码:99 / 109
页数:10
相关论文
共 50 条
  • [31] LEARNING GAUSSIAN GRAPHICAL MODELS USING DISCRIMINATED HUB GRAPHICAL LASSO
    Li, Zhen
    Bai, Jingtian
    Zhou, Weilian
    2018 IEEE INTERNATIONAL CONFERENCE ON ACOUSTICS, SPEECH AND SIGNAL PROCESSING (ICASSP), 2018, : 2471 - 2475
  • [32] Graphical models for sparse data: Graphical Gaussian models with vertex and edge symmetries
    Hojsgaard, Soren
    COMPSTAT 2008: PROCEEDINGS IN COMPUTATIONAL STATISTICS, 2008, : 105 - 116
  • [33] Regularized estimation of large-scale gene association networks using graphical Gaussian models
    Nicole Krämer
    Juliane Schäfer
    Anne-Laure Boulesteix
    BMC Bioinformatics, 10
  • [34] Regularized Estimation of Large-Scale Gene Association Networks using Graphical Gaussian Models
    Kraemer, Nicole
    PLS '09: PROCEEDINGS OF THE 6TH INTERNATIONAL CONFERENCE ON PARTIAL LEAST SQUARES AND RELATED METHODS, 2009, : 367 - 369
  • [35] Regularized estimation of large-scale gene association networks using graphical Gaussian models
    Kraemer, Nicole
    Schaefer, Juliane
    Boulesteix, Anne-Laure
    BMC BIOINFORMATICS, 2009, 10
  • [36] A MEAN FIELD APPROACH FOR ISING MODELS ON SCALE-FREE NETWORKS
    Iannone, G.
    Luongo, Orlando
    MODERN PHYSICS LETTERS B, 2011, 25 (07): : 453 - 464
  • [37] Catastrophes in scale-free networks
    Zhou, T
    Wang, BH
    CHINESE PHYSICS LETTERS, 2005, 22 (05) : 1072 - 1075
  • [38] Scale-free networks are rare
    Anna D. Broido
    Aaron Clauset
    Nature Communications, 10
  • [39] Revisiting "scale-free" networks
    Keller, EF
    BIOESSAYS, 2005, 27 (10) : 1060 - 1068
  • [40] Nucleation in scale-free networks
    Chen, Hanshuang
    Shen, Chuansheng
    Hou, Zhonghuai
    Xin, Houwen
    PHYSICAL REVIEW E, 2011, 83 (03):