Metrics for GO based protein semantic similarity: a systematic evaluation

被引:0
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作者
Catia Pesquita
Daniel Faria
Hugo Bastos
António EN Ferreira
André O Falcão
Francisco M Couto
机构
[1] Faculdade de Ciências da Universidade de Lisboa,XLDB, Departamento de Informática
[2] Faculdade de Ciências da Universidade de Lisboa,Centro de Química e Bioquímica, Departmento de Química e Bioquimica
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关键词
Gene Ontology; Semantic Similarity; Full Dataset; Electronic Annotation; Lower Common Ancestor;
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