Chemical exchange;
Double-quantum;
Lineshape analysis;
Multiple-quantum;
Titrations;
Two-dimensional NMR;
Zero-quantum;
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摘要:
NMR spectroscopy provides a powerful approach for the characterisation of chemical exchange and molecular interactions by analysis of series of experiments acquired over the course of a titration measurement. The appearance of NMR resonances undergoing chemical exchange depends on the frequency difference relative to the rate of exchange, and in the case of one-dimensional experiments chemical exchange regimes are well established and well known. However, two-dimensional experiments present additional complexity, as at least one additional frequency difference must be considered. Here we provide a systematic classification of chemical exchange regimes in two-dimensional NMR spectra. We highlight important differences between exchange in HSQC and HMQC experiments, that on a practical level result in more severe exchange broadening in HMQC spectra, but show that complementary alternatives to the HMQC are available in the form of HZQC and HDQC experiments. We present the longitudinal relaxation optimised SOFAST-H(Z/D)QC experiment for the simultaneous acquisition of sensitivity-enhanced HZQC and HDQC spectra, and the longitudinal and transverse relaxation optimised BEST-ZQ-TROSY for analysis of large molecular weight systems. We describe the application of these experiments to the characterisation of the interaction between the Hsp90 N-terminal domain and a small molecule ligand, and show that the independent analysis of HSQC, HMQC, HZQC and HDQC experiments provides improved confidence in the fitted dissociation constant and dissociation rate. Joint analysis of such data may provide improved sensitivity to detect and analyse more complex multi-state interaction mechanisms such as induced fit or conformational selection.
机构:
Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
Sjolander, Tobias F.
Blanchard, John W.
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机构:
GSI Helmholtzzentrum Schwerionenforsch GmbH, Helmholtz Inst Mainz, D-55128 Mainz, GermanyUniv Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
Blanchard, John W.
Budker, Dmitry
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机构:
GSI Helmholtzzentrum Schwerionenforsch GmbH, Helmholtz Inst Mainz, D-55128 Mainz, Germany
Johannes Gutenberg Univ Mainz, D-55099 Mainz, Germany
Univ Calif Berkeley, Dept Phys, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
Budker, Dmitry
Pines, Alexander
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机构:
Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
Lawrence Berkeley Natl Lab, Mat Sci Div, Berkeley, CA 94720 USAUniv Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
机构:
Department of Chemistry, University of California at Berkeley, CA,94720, United StatesDepartment of Chemistry, University of California at Berkeley, CA,94720, United States
Sjolander, Tobias F.
Blanchard, John W.
论文数: 0引用数: 0
h-index: 0
机构:
Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung GmbH, Mainz,55128, GermanyDepartment of Chemistry, University of California at Berkeley, CA,94720, United States
Blanchard, John W.
Budker, Dmitry
论文数: 0引用数: 0
h-index: 0
机构:
Helmholtz-Institut Mainz, GSI Helmholtzzentrum für Schwerionenforschung GmbH, Mainz,55128, Germany
Johannes Gutenberg-Universität Mainz, Mainz,55099, Germany
Department of Physics, University of California, Berkeley,CA,94720-7300, United StatesDepartment of Chemistry, University of California at Berkeley, CA,94720, United States
Budker, Dmitry
Pines, Alexander
论文数: 0引用数: 0
h-index: 0
机构:
Department of Chemistry, University of California at Berkeley, CA,94720, United States
Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley,CA,94720, United StatesDepartment of Chemistry, University of California at Berkeley, CA,94720, United States