Two-Dimensional NMR Lineshape Analysis

被引:0
|
作者
Christopher A. Waudby
Andres Ramos
Lisa D. Cabrita
John Christodoulou
机构
[1] Institute of Structural and Molecular Biology,
[2] University College London and Birkbeck College,undefined
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
NMR titration experiments are a rich source of structural, mechanistic, thermodynamic and kinetic information on biomolecular interactions, which can be extracted through the quantitative analysis of resonance lineshapes. However, applications of such analyses are frequently limited by peak overlap inherent to complex biomolecular systems. Moreover, systematic errors may arise due to the analysis of two-dimensional data using theoretical frameworks developed for one-dimensional experiments. Here we introduce a more accurate and convenient method for the analysis of such data, based on the direct quantum mechanical simulation and fitting of entire two-dimensional experiments, which we implement in a new software tool, TITAN (TITration ANalysis). We expect the approach, which we demonstrate for a variety of protein-protein and protein-ligand interactions, to be particularly useful in providing information on multi-step or multi-component interactions.
引用
收藏
相关论文
共 50 条
  • [1] Two-Dimensional NMR Lineshape Analysis
    Waudby, Christopher A.
    Ramos, Andres
    Cabrita, Lisa D.
    Christodoulou, John
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [2] Two-dimensional NMR lineshape analysis of single, multiple, zero and double quantum correlation experiments
    Christopher A. Waudby
    Margaux Ouvry
    Ben Davis
    John Christodoulou
    [J]. Journal of Biomolecular NMR, 2020, 74 : 95 - 109
  • [3] Two-dimensional NMR lineshape analysis of single, multiple, zero and double quantum correlation experiments
    Waudby, Christopher A.
    Ouvry, Margaux
    Davis, Ben
    Christodoulou, John
    [J]. JOURNAL OF BIOMOLECULAR NMR, 2020, 74 (01) : 95 - 109
  • [4] LINESHAPE CALCULATIONS FOR TWO-DIMENSIONAL POWDER SAMPLES
    SCHILDBERG, HP
    LAUTER, HJ
    [J]. SURFACE SCIENCE, 1989, 208 (03) : 507 - 532
  • [5] Analysis of the phases of signals in two-dimensional NMR
    Jeannerat D.
    [J]. eMagRes, 2017, 6 (01): : 161 - 172
  • [6] TWO-DIMENSIONAL NMR TECHNIQUES IN IONOMER ANALYSIS
    NATANSOHN, A
    EISENBERG, A
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1987, 193 : 12 - ANYL
  • [7] An introduction to one- and two-dimensional lineshape analysis of chemically exchanging systems
    Waudby, Christopher A.
    Alfonso, Ignacio
    [J]. JOURNAL OF MAGNETIC RESONANCE OPEN, 2023, 16-17
  • [8] Machine Learning Enabled Lineshape Analysis in Optical Two-Dimensional Coherent Spectroscopy
    Titze, Michael
    Namuduri, Srikanth
    Bhansali, Shekhar
    Li, Hebin
    [J]. 2020 CONFERENCE ON LASERS AND ELECTRO-OPTICS (CLEO), 2020,
  • [9] Machine learning enabled lineshape analysis in optical two-dimensional coherent spectroscopy
    Namuduri, Srikanth
    Titze, Michael
    Bhansali, Shekhar
    Li, Hebin
    [J]. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA B-OPTICAL PHYSICS, 2020, 37 (06) : 1587 - 1591
  • [10] Two-dimensional NMR structural analysis of selenomethionine.
    Carey, EM
    Pleban, PA
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2002, 223 : U87 - U87