Genome wide gene expression regulation by HIP1 Protein Interactor, HIPPI: Prediction and validation

被引:0
|
作者
Moumita Datta
Ananyo Choudhury
Ansuman Lahiri
Nitai P Bhattacharyya
机构
[1] Saha Institute of Nuclear Physics,Crystallography and Molecular Biology Division
[2] University of Calcutta,Department of Biophysics, Molecular Biology and Bioinformatics
[3] University of the Witwatersrand,Wits Bioinformatics
[4] Johannesburg,undefined
来源
BMC Genomics | / 12卷
关键词
Gene Ontology; HeLa Cell; Upstream Sequence; Neuro2A Cell; CREB Binding Protein;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Genome wide gene expression regulation by HIP1 Protein Interactor, HIPPI: Prediction and validation
    Datta, Moumita
    Choudhury, Ananyo
    Lahiri, Ansuman
    Bhattacharyya, Nitai P.
    BMC GENOMICS, 2011, 12
  • [2] Regulation of RE1 Protein Silencing Transcription Factor (REST) Expression by HIP1 Protein Interactor (HIPPI)
    Datta, Moumita
    Bhattacharyya, Nitai P.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (39) : 33759 - 33769
  • [3] Crystal structure at 2.8 Å of Huntingtin-interacting protein 1 (HIP1) coiled-coil domain reveals a charged surface suitable for HIP1 protein interactor (HIPPI)
    Niu, Qian
    Ybe, Joel A.
    JOURNAL OF MOLECULAR BIOLOGY, 2008, 375 (05) : 1197 - 1205
  • [4] Induction of apoptosis in cells expressing exogenous Hippi, a molecular partner of huntingtin-interacting protein Hip1
    Majumder, P
    Chattopadhyay, B
    Mazumder, A
    Das, P
    Bhattacharyya, NP
    NEUROBIOLOGY OF DISEASE, 2006, 22 (02) : 242 - 256
  • [5] Huntingtin Interacting Protein 1 (Hip1) Is a New Arthritis Severity Gene
    Laragione, Teresina
    Gulko, Percio
    Brenner, Max
    ARTHRITIS & RHEUMATOLOGY, 2016, 68
  • [6] Genome-wide in silico prediction of gene expression
    McLeay, Robert C.
    Lesluyes, Tom
    Partida, Gabriel Cuellar
    Bailey, Timothy L.
    BIOINFORMATICS, 2012, 28 (21) : 2789 - 2796
  • [7] Cloning, expression analysis, and chromosomal localization of HIP1R, an isolog of huntingtin interacting protein (HIP1)
    Naohiko Seki
    Masa-aki Muramatsu
    Sumio Sugano
    Yutaka Suzuki
    Akira Nakagawara
    M. Ohhira
    Akiko Hayashi
    Tada-aki Hori
    T. Saito
    Journal of Human Genetics, 1998, 43 : 268 - 271
  • [8] Cloning, expression analysis, and chromosomal localization of HIP1R, an isolog of huntingtin interacting protein (HIP1)
    Seki, N
    Muramatsu, M
    Sugano, S
    Suzuki, Y
    Nakagawara, A
    Ohhira, M
    Hayashi, A
    Hori, T
    Saito, T
    JOURNAL OF HUMAN GENETICS, 1998, 43 (04) : 268 - 271
  • [9] Domain-wide regulation of gene expression in the human genome
    Gierman, Hinco J.
    Indemans, Mireille H. G.
    Koster, Jan
    Goetze, Sandra
    Seppen, Jurgen
    Geerts, Dirk
    van Driel, Roel
    Versteeg, Rogier
    GENOME RESEARCH, 2007, 17 (09) : 1286 - 1295
  • [10] Differential Regulation of Gene Expression by Protein Kinase C Isozymes as Determined by Genome-wide Expression Analysis
    Caino, M. Cecilia
    von Burstin, Vivian A.
    Lopez-Haber, Cynthia
    Kazanietz, Marcelo G.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2011, 286 (13) : 11254 - 11264