metaBEETL: high-throughput analysis of heterogeneous microbial populations from shotgun DNA sequences

被引：0

作者：

Christina Ander

Ole B Schulz-Trieglaff

Jens Stoye

Anthony J Cox

机构：

[1] Bielefeld University,Genome Informatics, Faculty of Technology and CeBiTec

[2] Chesterford Research Park,Computational Biology Group, Illumina Cambridge Ltd.

来源：

BMC Bioinformatics | / 14卷

关键词：

Suffix; Taxonomic Classification; Copy Number Change; Human Microbiome Project; Suffix Array;

D O I：

暂无

中图分类号：

学科分类号：

摘要：

Environmental shotgun sequencing (ESS) has potential to give greater insight into microbial communities than targeted sequencing of 16S regions, but requires much higher sequence coverage. The advent of next-generation sequencing has made it feasible for the Human Microbiome Project and other initiatives to generate ESS data on a large scale, but computationally efficient methods for analysing such data sets are needed.

引用

共 50 条

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