An evolutionary method for learning HMM structure: prediction of protein secondary structure

被引:0
|
作者
Kyoung-Jae Won
Thomas Hamelryck
Adam Prügel-Bennett
Anders Krogh
机构
[1] University of Copenhagen,Bioinformatics Centre, Department of Molecular Biology
[2] University of Southampton,School of Electronics and Computer Science
[3] UCSD,Department of Chemistry & Biochemistry
来源
关键词
Secondary Structure; Secondary Structure Prediction; Training Sequence; Emission Probability; Protein Secondary Structure;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] An evolutionary method for learning HMM structure: prediction of protein secondary structure
    Won, Kyoung-Jae
    Hamelryck, Thomas
    Pruegel-Bennett, Adam
    Krogh, Anders
    BMC BIOINFORMATICS, 2007, 8 (1)
  • [2] Protein secondary structure prediction with Bayesian learning method
    Wang, PL
    Zhang, D
    14TH IEEE INTERNATIONAL CONFERENCE ON TOOLS WITH ARTIFICIAL INTELLIGENCE, PROCEEDINGS, 2002, : 252 - 257
  • [3] Protein Secondary Structure Prediction Using an Evolutionary Computation Method and Clustering
    Zamani, Masood
    Kremer, Stefan C.
    2015 IEEE CONFERENCE ON COMPUTATIONAL INTELLIGENCE IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY (CIBCB), 2015, : 118 - 123
  • [4] Protein secondary structure prediction with a hybrid RNN/HMM system
    Chen, JM
    Chaudhari, NS
    PROCEEDINGS OF THE INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN), VOLS 1-5, 2005, : 538 - 541
  • [5] Protein secondary structure prediction by using deep learning method
    Wang, Yangxu
    Mao, Hua
    Yi, Zhang
    KNOWLEDGE-BASED SYSTEMS, 2017, 118 : 115 - 123
  • [6] Protein Secondary Structure Prediction With a Reductive Deep Learning Method
    Lyu, Zhiliang
    Wang, Zhijin
    Luo, Fangfang
    Shuai, Jianwei
    Huang, Yandong
    FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 2021, 9
  • [7] HMM in Predicting Protein Secondary Structure
    Huang Jing
    WuhanUniversityJournalofNaturalSciences, 2003, (S1) : 307 - 310
  • [8] PASSML:: combining evolutionary inference and protein secondary structure prediction
    Liò, P
    Goldman, N
    Thorne, JL
    Jones, DT
    BIOINFORMATICS, 1998, 14 (08) : 726 - 733
  • [9] MACHINE LEARNING APPROACH FOR THE PREDICTION OF PROTEIN SECONDARY STRUCTURE
    KING, RD
    STERNBERG, MJE
    JOURNAL OF MOLECULAR BIOLOGY, 1990, 216 (02) : 441 - 457
  • [10] Protein Secondary Structure Prediction Based on Deep Learning
    Zheng, Lin
    Li, Hong-ling
    Wu, Nan
    Ao, Li
    3RD INTERNATIONAL SYMPOSIUM ON MECHATRONICS AND INDUSTRIAL INFORMATICS, (ISMII 2017), 2017, : 171 - 177