Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data

被引:0
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作者
Victor G Levitsky
Ivan V Kulakovskiy
Nikita I Ershov
Dmitry Yu Oshchepkov
Vsevolod J Makeev
T C Hodgman
Tatyana I Merkulova
机构
[1] Institute of Cytology and Genetics of the Siberian Division of Russian Academy of Sciences,Engelhardt Institute of Molecular Biology
[2] Novosibirsk State University,Department of Computational Systems Biology, Vavilov Institute of General Genetics
[3] Russian Academy of Sciences,Multidisciplinary Centre for Integrative Biology, School of Biosciences
[4] Russian Academy of Sciences,undefined
[5] University of Nottingham,undefined
来源
BMC Genomics | / 15卷
关键词
ChIP-Seq; EMSA; Transcription factor binding sites; FoxA; SiteGA; PWM; Transcription factor binding model; Dinucleotide frequencies;
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