Inferring duplication episodes from unrooted gene trees

被引:0
|
作者
Jarosław Paszek
Paweł Górecki
机构
[1] Warsaw University,
[2] Faculty of Mathematics,undefined
[3] Informatics and Mechanics,undefined
来源
BMC Genomics | / 19卷
关键词
Genomic duplication; Duplication episode; Minimum episodes problem; Reconciliation; Unrooted gene tree; Species tree;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [41] Scaling limits for a family of unrooted trees
    Wang, Minmin
    [J]. ALEA-LATIN AMERICAN JOURNAL OF PROBABILITY AND MATHEMATICAL STATISTICS, 2016, 13 (02): : 1039 - 1067
  • [42] SPR Distance Computation for Unrooted Trees
    Hickey, Glenn
    Dehne, Frank
    Rau-Chaplin, Andrew
    Blouin, Christian
    [J]. EVOLUTIONARY BIOINFORMATICS, 2008, 4 : 17 - 27
  • [43] On the Shapley Value of Unrooted Phylogenetic Trees
    Kristina Wicke
    Mareike Fischer
    [J]. Bulletin of Mathematical Biology, 2019, 81 : 618 - 638
  • [44] The agreement problem for unrooted phylogenetic trees is FPT
    [J]. 1600, Brown University (18):
  • [45] Inferring confidence sets of possibly misspecified gene trees
    Strimmer, K
    Rambaut, A
    [J]. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2002, 269 (1487) : 137 - 142
  • [46] Consistency and inconsistency of consensus methods for inferring species trees from gene trees in the presence of ancestral population structure
    DeGiorgio, Michael
    Rosenberg, Noah A.
    [J]. THEORETICAL POPULATION BIOLOGY, 2016, 110 : 12 - 24
  • [47] Inferring Species Trees Directly from Biallelic Genetic Markers: Bypassing Gene Trees in a Full Coalescent Analysis
    Bryant, David
    Bouckaert, Remco
    Felsenstein, Joseph
    Rosenberg, Noah A.
    RoyChoudhury, Arindam
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2012, 29 (08) : 1917 - 1932
  • [48] Gene trees and species trees: The gene-duplication problem is fixed-parameter tractable
    Stege, U
    [J]. ALGORITHMS AND DATA STRUCTURES, 1999, 1663 : 288 - 293
  • [49] NANUQ: a method for inferring species networks from gene trees under the coalescent model
    Elizabeth S. Allman
    Hector Baños
    John A. Rhodes
    [J]. Algorithms for Molecular Biology, 14
  • [50] UNROOTED TREES REVISITED - TOPOLOGY AND POETIC DATA
    JUILLARD, M
    LUONG, NX
    [J]. COMPUTERS AND THE HUMANITIES, 1989, 23 (03): : 215 - 225