Indexing a protein-protein interaction network expedites network alignment

被引:0
|
作者
Md Mahmudul Hasan
Tamer Kahveci
机构
[1] University of Florida,Department of Computer & Information Science and Engineering
来源
关键词
Network alignment; Protein-protein interaction network; Indexing;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [41] The glomerular transcriptome and a predicted protein-protein interaction network
    He, Liqun
    Sun, Ying
    Takemoto, Minoru
    Norlin, Jenny
    Tryggvason, Karl
    Samuelsson, Tore
    Betsholtz, Christer
    JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2008, 19 (02): : 260 - 268
  • [42] Probabilistic model of the human protein-protein interaction network
    Rhodes, DR
    Tomlins, SA
    Varambally, S
    Mahavisno, V
    Barrette, T
    Kalyana-Sundaram, S
    Ghosh, D
    Pandey, A
    Chinnaiyan, AM
    NATURE BIOTECHNOLOGY, 2005, 23 (08) : 951 - 959
  • [43] Towards an integrated protein-protein interaction network: A relational Markov network approach
    Jaimovich, A
    Elidan, G
    Margalit, H
    Friedman, N
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2006, 13 (02) : 145 - 164
  • [44] Efficient updates of network motif instances in the Extended Protein-Protein Interaction Network
    Kim, Wooyoung
    Kurmar, Sheil
    2014 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2014,
  • [45] Identifying Human Essential Genes by Network Embedding Protein-Protein Interaction Network
    Dai, Wei
    Chang, Qi
    Peng, Wei
    Zhong, Jiancheng
    Li, Yongjiang
    BIOINFORMATICS RESEARCH AND APPLICATIONS, ISBRA 2019, 2019, 11490 : 127 - 137
  • [46] Network Embedding the Protein-Protein Interaction Network for Human Essential Genes Identification
    Dai, Wei
    Chang, Qi
    Peng, Wei
    Zhong, Jiancheng
    Li, Yongjiang
    GENES, 2020, 11 (02)
  • [47] Reconstruction of dynamic protein-protein interaction network via graph convolutional network☆ ☆
    He, Yue
    Zhu, Fei
    EXPERT SYSTEMS WITH APPLICATIONS, 2025, 259
  • [48] Reconstruction of the Protein-Protein Interaction Network for Protein Complexes Identification by Walking on the Protein Pair Fingerprints Similarity Network
    Xu, Bo
    Liu, Yu
    Lin, Chi
    Dong, Jie
    Liu, Xiaoxia
    He, Zengyou
    FRONTIERS IN GENETICS, 2018, 9
  • [49] Explore Protein-Protein Interaction Network Involved in Glucosinolate Biosynthesis
    Sun Xiaofang
    Chu Yanshuo
    Liu, Yaqiu
    2014 INTERNATIONAL CONFERENCE ON MECHATRONICS AND CONTROL (ICMC), 2014, : 996 - 1000
  • [50] A human protein-protein interaction network:: A resource for annotating the proteome
    Stelzl, U
    Worm, U
    Lalowski, M
    Haenig, C
    Brembeck, FH
    Goehler, H
    Stroedicke, M
    Zenkner, M
    Schoenherr, A
    Koeppen, S
    Timm, J
    Mintzlaff, S
    Abraham, C
    Bock, N
    Kietzmann, S
    Goedde, A
    Toksöz, E
    Droege, A
    Krobitsch, S
    Korn, B
    Birchmeier, W
    Lehrach, H
    Wanker, EE
    CELL, 2005, 122 (06) : 957 - 968